Gene Shewmr4_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1486 
Symbol 
ID4252064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1741724 
End bp1742635 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content50% 
IMG OID638118085 
Producthypothetical protein 
Protein accessionYP_733621 
Protein GI113969828 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000118993 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTT TTATAGATGC ACTGGCGACG ATAGAAGTCG GTGAAGATGC CACGCGATTA 
TTCCATGGCC GTGGCGGTTA TTACCCTGGC TGCGAACATC TTTGTTTAGA TTGGTTCGCG
CCCGTGTTGT TATTGACCAG TTTTATTCCC CTCGAAGCGG CCGAGTTGGC CCTGTGCCAA
CAGGCGATTA CGGCGCGTTG GCAAGCGATA CAGCCCAATC GGCCGTTAAA CTTGGTGTAT
CAATATCGTA GTGGTGGCGA AACCTTTAGC CAAGTACTGG CGGGTGAGGT GCCCGATCCC
CATGTGGTCA CTGAAAATGG TGCCCAGTTT CAGGTACATT TATTGCGGGG ACAAAACCAC
GGTTTGTTCC TCGATATGGC CAATGGCCGT GAATGGGTAA GAGCCCATGC TCGCCATAAG
AAAGTGCTGA ATTTGTTTGC TTATACCTGT GGTTTCTCGG TGGCAGCACT GCAGGGCGGT
GCCGATGAAG TGGTGAACAT GGACATGAGT AAAGGCGCGT TAGCCATAGG CAAGCAGAAT
CATCTTCTCA ATGGCTTTAG CGCGGGCGCA CGCTTCTTAG GGCACGATAT TTTTAAGTCA
TGGGGTAAGT TACGCAAGTT AGGCCCCTAT GACATTGTGG TTGCCGATCC GCCGAGTAAT
CAAAAGGGCA GTTTCGTTGC GACTAAGGAT TATGTGCGTT TGATCAGGCA TTTACCCGAG
TTGTTAGCCG AGAATGCCGA AGTGCTACTC TGCTTAAATG CACCGGAACT CGATACCCAG
TTTTTACGTC AGCAAGTCGA AGACGCCGCG CTTGCACTCG AATACCTTGA GCGCTTACCC
AATCCCGCTG CCTTTGTTGA TGTCTCTGAG GAGAAATCAT TAAAGGTGCT ACGTTATCGC
TTAAAGGCGT AA
 
Protein sequence
MQRFIDALAT IEVGEDATRL FHGRGGYYPG CEHLCLDWFA PVLLLTSFIP LEAAELALCQ 
QAITARWQAI QPNRPLNLVY QYRSGGETFS QVLAGEVPDP HVVTENGAQF QVHLLRGQNH
GLFLDMANGR EWVRAHARHK KVLNLFAYTC GFSVAALQGG ADEVVNMDMS KGALAIGKQN
HLLNGFSAGA RFLGHDIFKS WGKLRKLGPY DIVVADPPSN QKGSFVATKD YVRLIRHLPE
LLAENAEVLL CLNAPELDTQ FLRQQVEDAA LALEYLERLP NPAAFVDVSE EKSLKVLRYR
LKA