| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1482 |
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| Symbol | |
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| ID | 4252060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1737394 |
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| End bp | 1738617 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638118081 |
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| Product | sodium/glutamate symporter |
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| Protein accession | YP_733617 |
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| Protein GI | 113969824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.485218 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCA CTTATACAAT TGGCGAACTC GAGTCGTTCT TAATTGCTAT CTTCGTGCTG
TTTATTGGCC ATTCCATCAA TCGCCATGTG CGTGTTTTTA GACAATACAA TATTCCCGAA
CCTATCGTTG GCGGGCTAGT CGTCGCCGCA GTGGTTGCCT TTTTACATTT TCAAGACATC
ACACTCGCCT TTAGTTTACC CATGCAAAAC ACCTTAATGC TGATGTTTTT CAGTACGATA
GGTTTATCGG CAAACTATAA GCTACTGCTC AGTGGTGGCA AAAAAGTGTT TATCTTTCTC
GGCGTAGCTT CTGTCTATAT CGTCATTCAA AATGCTGTCG GGGTGAGCCT TGCAAGCCTC
CTCGGTTTAG ACCCCATCTT AGGCCTTATC GCAGGCTCGA TTACCCTCTC CGGCGGCCAT
GGCACTGGCG TTGCCTGGTC ACAAACCTTT GCCGAAAACT ACGGCATCAA TACCTTAGAG
CTTGCTATGG CGGCAGCCAC CTTTGGCTTA GTCATGGGCG GTATCATCGG CGGCCCCATC
GCGCAGCGAT TGATTGGCAA ACATAATCTG GTGTCAAGTT ATGGCATGGG CCGTAAGCAC
CACACCACGC ATCCACAACT GGTGACCTAT GATCAGCTCG AAGAGGACCA AGTCACCGCT
AAGACAATCA TTGAAACCCT GTTTGTGCTG CTCATCTGCG TTGCTGGGGC CAAATGGTTT
ACAGTGTTTG TCAGCGAATA TCAGCTGAAT TGGCTCAAGA TGCCGGACTT TGTCTATGCC
CTGTTTCTTG GGGTGATCAT CGCCAACATC ACCGAAGTGA CCCGCGGTTA TAAACCCCAT
ACTGAGAGTA TCGATGTGAT AGGTACTGTG GCGCTGTCGT TATTTCTTTC TATGGCTTTG
ATGAACCTCA AGTTGTGGGA AATTTTGGAT CTGGCTATCC CATTACTGAT TATCCTGCTG
GTGCAAACCG CAGTGCTGGC GGTATTCGCC TATTTTGTAA CCTTTAAAAT TATGGGCAGT
AACTACGACG CGGCGGTGAT CACCGGCGGT CACTGTGGCT TTGGTATGGG TGCCACTCCT
ACTGCGGTGA TGAATATGGG CGCACTAGTA TCACGCACAG GCCCTTCTCC GCAGGCCTTT
ATGGTGGTAC CGATTGTCGG CGCCTTCTTT ATCGATATAG TTAATTTAAT TGTATTGCAG
GGCTACCTCA GCTTTTTGAT GTAA
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| Protein sequence | MHTTYTIGEL ESFLIAIFVL FIGHSINRHV RVFRQYNIPE PIVGGLVVAA VVAFLHFQDI
TLAFSLPMQN TLMLMFFSTI GLSANYKLLL SGGKKVFIFL GVASVYIVIQ NAVGVSLASL
LGLDPILGLI AGSITLSGGH GTGVAWSQTF AENYGINTLE LAMAAATFGL VMGGIIGGPI
AQRLIGKHNL VSSYGMGRKH HTTHPQLVTY DQLEEDQVTA KTIIETLFVL LICVAGAKWF
TVFVSEYQLN WLKMPDFVYA LFLGVIIANI TEVTRGYKPH TESIDVIGTV ALSLFLSMAL
MNLKLWEILD LAIPLLIILL VQTAVLAVFA YFVTFKIMGS NYDAAVITGG HCGFGMGATP
TAVMNMGALV SRTGPSPQAF MVVPIVGAFF IDIVNLIVLQ GYLSFLM
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