| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1479 |
|---|
| Symbol | |
|---|
| ID | 4252057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1733050 |
|---|
| End bp | 1733799 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638118078 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_733614 |
|---|
| Protein GI | 113969821 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAACG TCGTTTCAAA AAACAGTGCC ATCAATGTTG TTAACCTCGA AAAATCGGTG
ACTACTCAGG AAGGTTCGCT CACTATCCTC AAGGGCATTA ACTTAGATGT CAAGCAGGGG
GAAAGTGTGG CGATATTAGG CCCCTCAGGT TCGGGCAAAT CGACACTGCT TGGCTTACTC
GCCGCGCTCG ATACCCCCAC TTCGGGGGAG ATTTGGCTCG ATGGCCAAGC CCTATCACCG
CTCAATGAAG AACAGAAAGC CGCGCTGCGT AAGCAGAAGG TGAGCTTTAT TTTTCAATCT
TTTATGTTAG TTGATACCTT AACTGCCCTC GAAAATGTGA TGCTACCTGC CGAGCTTGCT
GGGGTTAAAA ATGCCAAGGA GAAGGCCGAG GCCATGCTGG GGCGCGTGGG GTTATCCCAC
CGTTTGACCC ATTTACCTAA ACAGCTATCC GGCGGCGAGC AGCAAAGGGT GGCCATTGCT
CGCGCCTTTA TCTGTGAACC TAAGGTGCTA TTTGCCGACG AGCCAACCGG CAATTTGGAC
AGTGTTAACG GCCATAAAAT TGCCGATATG TTGTTTGAGC TGAACCAAGA GAGCCACACC
ACGCTCATCC TAGTCACCCA CGACTTGCAA TTGGCGAAGC GCTGCCAAAG GCAACTGGTT
ATGGACAACG GCCACTTACA GGAAGAGTTA GATTCGGCCT CATCGCACAG CGTGAATGAC
AACCTTGAAT TAAGCGCCAA GGAGGCCTAA
|
|---|
| Protein sequence | MSNVVSKNSA INVVNLEKSV TTQEGSLTIL KGINLDVKQG ESVAILGPSG SGKSTLLGLL
AALDTPTSGE IWLDGQALSP LNEEQKAALR KQKVSFIFQS FMLVDTLTAL ENVMLPAELA
GVKNAKEKAE AMLGRVGLSH RLTHLPKQLS GGEQQRVAIA RAFICEPKVL FADEPTGNLD
SVNGHKIADM LFELNQESHT TLILVTHDLQ LAKRCQRQLV MDNGHLQEEL DSASSHSVND
NLELSAKEA
|
|---|
| |