| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1469 |
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| Symbol | |
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| ID | 4252047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1717553 |
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| End bp | 1720036 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638118068 |
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| Product | hypothetical protein |
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| Protein accession | YP_733604 |
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| Protein GI | 113969811 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000892624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TCATTTTGTG TGTTGCGATT GCATCAGCAC TGGGCCTCAC AGGATGTGGA
GAGGACAGTT ATAACGAACT CAAGGATAAG ACAGACCCGC TCATCCCTGA ATCCCATATG
GTGTTTGACC CCGCGAATGC TAAAGTGCCT TTGCCTAATG ATTTGTTGTT TAGCGGCACT
ACAGACGGCA CCTTATCAAT CCCGGGGGAA AGTTCGGGGA ACTATGTCGA TCCGCAAATT
GCTCTTGGTG CCTTAGATGG ATGGTCAACT ACATCTCCCA TTTCAATCGA TCTCGAACTC
GCTAAAGATC ACGATGGCAC ACAACTGACC CTGATGGCCG CATCGGTTGC CCAACCGGGC
GCAGTGAGAA TGTTTGAGGC CACAGTGGGT GGTCCATTGT CATCTGATCC TGAATGTACC
ACTAAACCGT CAGTATCTGC CTGTAAAGTC GGCGATGAAT TGCAATTTGG TGTGGATTTT
GTGTCGATGG CATCGGGTAA CAAAGTCGTT ATCGTGCCAC TCAAACCGCT AAAAGCCGGC
CAGTCTTATA TTTATGCGAC AACCAAGTTA ATCCAAGATT CAGAGGAACG AGGCATTGCC
CCTTCAACGA CCTATGGTAC GTTGAAGATG GACATCAACA CCTTACCCCT AGAAACGCCT
GATCAATTGA TGCTGCAAAC CTTGATCAAC AGTTATGAAA AGGGCATGGC TGCGGCACAT
AATGTTGATA CCTCAACCAT TACCTATTCA GGCTTGTTTA CCACTCAATC GGTAGCAAAC
GTCTATGAAA CCACAAAACT CTTGATGGCG CAGGGCGCGC CTTATGCCCC AAGTTTTGCG
CAAATGCCCA CCCCTGCGGG TTACACTGTG GCTCAGGCTG CTGGTTTAAC TCCAGCAGAT
GGCGCGGCGT ATGTAGTATC GAATCTAGCC GATGTTTATA CCGCTAAGAT TAAATTGCCG
ATTTACGGTG ACTGTTCTTC GGTCAGTTGC TTGTCATCTG CAGGTCAGCC GCTGATCAAT
GGCCGCTGGA AAGCCCAAGG TGATAGCCCT GTTTCGGTAT TATTAGCGCT GCAAGCGGGT
ACCTTAAGTC AAACCAACTT TGGTATGCAG GCAGTAGCGA ATGGGATTGC AAATCCTGCC
GATGCCTTAG CGAATCCTTC TCTGATGGCG GGTAAAACCT GGTTGCTCGA TGATGGAACG
GCAGCGGATA AAACCAAGCA TTTAACCAAA TTTAACCCCA TCCCTGCGAT TAAAGGTTAT
GAAACGGTAC CTGTACTGAT TTCTATGCCA AATGCGACTA AACTCGCGGC CTTCTATCAG
CAACAAGGGT TAACCTTTAC CCCACCGACT TCTGGCTGGC CAACGACGAT TGCGCTACAT
GGTTTAGGCG GCGGTAAGGA AATGTCATTA GCCTATGCGG GCAGTTATGC AGCTATGGGC
GTGGCAACGG TAGCCATCGA TATGCCTTTA CATGGTGCTC GCTCGTTCGA TGCCAATGGC
GATGGGGTTT ACGAAGTATC GGCAACCGAT CCTTCCTTCG GTAACGTGAT TGGTACGCCT
GATGCCTTTA AAAATGGTAA TCCACTCGTC TTCGTGAATA TCTCAAGCAC GCTATCGGTG
CGGGATAACT TCCGTCAGGC CACCATGGAT CACCTTGGCG TGCGTTTAGC CTTAACGGGG
TTAGCGCAGG GGCTTGCACA GGCTAATCAA CCACAAGTAT TCGATATTTC CAAGATTAGC
GCGCAGGGCT TAAGTTTAGG TGCGATTGTC GGTACCGACT TTGCGACTTA TGCCAGCACG
GGCATGAAAA ATCCAAGCAC GGGTGAAGCG CTACCTAACC CTTATGCCAT CAATGCGGTC
TCTCTGGCGG CGCCAGCGGG TGGTTTAGCG GGCGCGTTTG CTGGTTCTGC GACCTTTGGC
CCAGTGCTGT TTAGCAATGT GACTGCTTCT GCAACGTTCC AAGCATTAGT GGATAAAGCC
AATACTGCGG GATACGAGCC TGGCAGCCCA GAATATGCGG CATTAGTACA AGGGGTTTAT
GCGCAGTTTA TTCCAACCTT TGCCTTTGCG GTGCAAACGG CGGTGGATTC AGCGGATCCG
GTTAACCATG CAGGTATGTT AAAAGCAACG GGATTACCCG TGCACTTAAT CGAAATCGCG
GGTGATGGTA ACGGTAACTT AGCTGACCAA GTGTTACCTA ATCGCGTCGA TAACTTCCCA
CTCTCAGGCA CTGAGCCGTT GATCTCGGCA ATCGGTCTGC CTTGTGTGGA TGCAACCACC
AAAGGTTCTG GTGCGGTGCG TTTTGCTAAG GGGCACCATA GCTCAATTGT TGACCCAAGT
GAGAAGAGTT CAACGGATGG TATGGCCGCT GCGGCAACCG TTGAGATGCA GACGCAAGTG
GCGACCTATG CTTCTACCGC AGGTAAAGGT GAAGCGACGA TTTTCGTCAC CGATCCAAGC
GTGATTTCGA CCTGTTCTAA CTAG
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| Protein sequence | MKRLILCVAI ASALGLTGCG EDSYNELKDK TDPLIPESHM VFDPANAKVP LPNDLLFSGT
TDGTLSIPGE SSGNYVDPQI ALGALDGWST TSPISIDLEL AKDHDGTQLT LMAASVAQPG
AVRMFEATVG GPLSSDPECT TKPSVSACKV GDELQFGVDF VSMASGNKVV IVPLKPLKAG
QSYIYATTKL IQDSEERGIA PSTTYGTLKM DINTLPLETP DQLMLQTLIN SYEKGMAAAH
NVDTSTITYS GLFTTQSVAN VYETTKLLMA QGAPYAPSFA QMPTPAGYTV AQAAGLTPAD
GAAYVVSNLA DVYTAKIKLP IYGDCSSVSC LSSAGQPLIN GRWKAQGDSP VSVLLALQAG
TLSQTNFGMQ AVANGIANPA DALANPSLMA GKTWLLDDGT AADKTKHLTK FNPIPAIKGY
ETVPVLISMP NATKLAAFYQ QQGLTFTPPT SGWPTTIALH GLGGGKEMSL AYAGSYAAMG
VATVAIDMPL HGARSFDANG DGVYEVSATD PSFGNVIGTP DAFKNGNPLV FVNISSTLSV
RDNFRQATMD HLGVRLALTG LAQGLAQANQ PQVFDISKIS AQGLSLGAIV GTDFATYAST
GMKNPSTGEA LPNPYAINAV SLAAPAGGLA GAFAGSATFG PVLFSNVTAS ATFQALVDKA
NTAGYEPGSP EYAALVQGVY AQFIPTFAFA VQTAVDSADP VNHAGMLKAT GLPVHLIEIA
GDGNGNLADQ VLPNRVDNFP LSGTEPLISA IGLPCVDATT KGSGAVRFAK GHHSSIVDPS
EKSSTDGMAA AATVEMQTQV ATYASTAGKG EATIFVTDPS VISTCSN
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