Gene Shewmr4_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1396 
Symbol 
ID4251415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1625707 
End bp1626093 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content48% 
IMG OID638117995 
Producthypothetical protein 
Protein accessionYP_733531 
Protein GI113969738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000125062 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000128265 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAAAAG TCATTGGACT CGGTGGTATT TTCTTTAAAA GTACTGATCC CATCGCGTTA 
GCCACTTGGT ATCAAACCCA TCTGCAAATA CCAATTGAAA ACTGGGGCGG CGCAGCCTTT
TATCACAACG ATAAACCGAC GCCCGGTTAC CATGTGTGGA CCCCCTTCGA CCATAACACC
AGTTATTTTG CCCCGACCGA CAAAAGCTTT ATGTTCAATT TTATTGTTGA CGATCTGGAG
CAGGCTCTGC TTCAAATCAC TCAGGGCGGC GGCAAACAGG TTGGAGATAT CGAAGACTCA
GAATTTGGCC GCTTCGGTTG GTTTATCGAC CCCGATGGCA ATAAAGTCGA ATTATGGCAG
CCAAGTCCGA TCCCTCCCGT AAACTAA
 
Protein sequence
MAKVIGLGGI FFKSTDPIAL ATWYQTHLQI PIENWGGAAF YHNDKPTPGY HVWTPFDHNT 
SYFAPTDKSF MFNFIVDDLE QALLQITQGG GKQVGDIEDS EFGRFGWFID PDGNKVELWQ
PSPIPPVN