Gene Shewmr4_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1395 
Symbol 
ID4251414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1624832 
End bp1625548 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content48% 
IMG OID638117994 
Producthypothetical protein 
Protein accessionYP_733530 
Protein GI113969737 
COG category[S] Function unknown 
COG ID[COG2859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000811634 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000143355 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAACGCA ATTATCTACT TCCCGCCCTC GTGCTTGGCG GTTTCTTATG TGCAGGCATG 
GTCTATGTAG GACAAAGCGC CAGCTCGGCG CTGCTAGAGA TGAAAGCCCT AGAGCGCACA
GTTACAGTTA AAGGGCTGGC CGAAAAGGAA GTGAAAGCCA ATATCGCCAT CTGGCCGATT
AACTTCACCG AAGTCGACAA TAACCTGCCT AAGCTCTACG ACACAGTGCA GCAAAAAACC
GACAGAGTGG TCGCCTACCT CAAGGAACAG GGTTTTAGCG ATAGCGAAAT TACAGTCTCG
CTGCCGACAA TAGAAGACAG ACAGGCTCAA GGCTACGTTG ACCCGAATGT GCGCTATCGT
TACTCGGCAA AGGTGAATCT TTCTGTCTAT ACCCCACAAA TTGATTTAAT GCTCAGCACG
CGTAAGCAAA TGATAAATCT AGTTAAAGAA GGCATCGCCA TCGGTAGCCA AGATTATGAA
AACCGCACTG AGTTTTTATT TACGGCACTC AATGATGTGA AACCGACCAT GGTGCAGGAA
GCAACGCAAA ATGCGCGGGA AGTGGCCGAA AAGTTTGCCA AGGACTCACA ATCGCGTCTG
GGTAAGATTA AGAGTGCCAG CCAAGGTCAG TTTACGATTT CCGATCGTGA CAGCAGCACG
CCTTACATAA AACAAATTCG CATTGTGTCT ACGCTGACCT ACTATTTAAA CGATTGA
 
Protein sequence
MQRNYLLPAL VLGGFLCAGM VYVGQSASSA LLEMKALERT VTVKGLAEKE VKANIAIWPI 
NFTEVDNNLP KLYDTVQQKT DRVVAYLKEQ GFSDSEITVS LPTIEDRQAQ GYVDPNVRYR
YSAKVNLSVY TPQIDLMLST RKQMINLVKE GIAIGSQDYE NRTEFLFTAL NDVKPTMVQE
ATQNAREVAE KFAKDSQSRL GKIKSASQGQ FTISDRDSST PYIKQIRIVS TLTYYLND