| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1394 |
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| Symbol | |
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| ID | 4251413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1623638 |
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| End bp | 1624651 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117993 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_733529 |
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| Protein GI | 113969736 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000175067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000192575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCTGCAA TCTCACGTAC TCTATTCACA TTATTCGTTT TTTCCCCCTT TGCCACCCAG
GCTGCGCCCT TGGCGACCCT CGAGGTAATG AGCAAACCGT ACGCGAATTG GGTGACCTTA
GACGCCAGTA TCGAGGCCGT CAAAGCGGCT ACCGTCTCGG CGCAAACCTC AGGGCGTATC
GTTAAGCTCA ACTACGATGT TAATGATGTC GTGCCAGAAG GCGCGGCGTT ACTCGAGATC
ACCAGTAAAG AGCAAGGCGC GGAACTTGCA AGCTATGAGG CCGATCTCGC CAAAGCCACA
GCCCTGAATG TGGAGGCGCA GGCCCAATAC AAACGCTATA AAGAACTCTT TCCTCAAGGC
GCGATTTCAA AAGGCGCCAT GGATGAAGCG ACCGCCAATG CCAAGGCCGC CGAGCAAGCC
GTGAGTGCCG CCAAAGCTAG GGTCATCAAA GCCAGCGAAT CCCTCAAATA CACTGTAGTA
TCGGCGCCAT TTAGCGGGAT TGTCACCGAG CGTTTAGTCG AATTAGGCGA AACCGTCAGT
GTCGGTCAAC CGCTACTGTC CGGGTTTTCG CCGAGCCAAA TGCGCGCTAT TACCCAAGTG
CCACAGCGCT ATATTCAGCA ACTGAAAAAC GCGCCTGAGT TTATGGTGCG CTTAAGTGAC
GGCCGTGAAC TCACCTCCAA GGATCTCACC ATCTTTAGCT TTGCCGATCC TGTGAGTCAT
AGCTATCAAG TGCGGATTAA CCTGCCAAAG GATGAACCCA ACCTGCAACC TGGAACCTGG
GCCAAGGCGC TGTTTAAAAA TGGCGAGCGG GAAAAGATCC AACTGCCGAC CTCGGCGCTT
ATCACCATGA ATGAACTCAG CAGTGTCTAC CTGAAAAAAG GCGAGCAATT CGTGCTCACC
CAGGTGCGCG TCTCTGAGCC TGTCGATGGT GAAGTGGAAG TGCTCGCAGG GCTGAGAACC
GGTGATATTG TCGCCGTGGA TGCTTACCAA GTGTTGCTTG AACAAAAGCA ATAA
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| Protein sequence | MAAISRTLFT LFVFSPFATQ AAPLATLEVM SKPYANWVTL DASIEAVKAA TVSAQTSGRI
VKLNYDVNDV VPEGAALLEI TSKEQGAELA SYEADLAKAT ALNVEAQAQY KRYKELFPQG
AISKGAMDEA TANAKAAEQA VSAAKARVIK ASESLKYTVV SAPFSGIVTE RLVELGETVS
VGQPLLSGFS PSQMRAITQV PQRYIQQLKN APEFMVRLSD GRELTSKDLT IFSFADPVSH
SYQVRINLPK DEPNLQPGTW AKALFKNGER EKIQLPTSAL ITMNELSSVY LKKGEQFVLT
QVRVSEPVDG EVEVLAGLRT GDIVAVDAYQ VLLEQKQ
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