Gene Shewmr4_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1365 
SymbolgltX 
ID4251384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1588908 
End bp1590317 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content46% 
IMG OID638117955 
Productglutamyl-tRNA synthetase 
Protein accessionYP_733500 
Protein GI113969707 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000124879 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0325353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTA AGACGCGTTT TGCCCCAAGC CCAACAGGCT TTTTGCACGT GGGCGGTGCC 
CGTACAGCTC TTTATTCTTG GTTACAAGCT CGTGCCAATA ATGGCGAGTT TGTTTTACGT
ATCGAAGATA CGGATATTGA ACGTTCTACT CAGGCTGCAT GTGATGCCAT TTTAGAGGGC
ATGAACTGGT TAGGTCTGAC GTGGGATGAG GGCCCGTACT ATCAAACTAA GCGTTTTGAT
CGTTATAACG AAATCATCGC GCAGATGTTA GAGCAGGGCA CAGCTTATAA ATGTTATTGC
TCGCGTGAAC GTATCGATGC TTTAAGAGAA GCACAAGCGG CAAATGGCGA AGCACAAAAA
TACGATGGTT GCTGCCGTGA CTTGCCGGCG CGTGACACTG ACGAGCCTTT TGTTGTGCGT
TTTAAAAACC CCATCGGCGG TTCAGTGGTA TTTGATGACC ATGTCCGTGG CCGTATCGAG
TTTTCAAACG ATGCATTAGA TGATCTGATC ATTGCCCGTA CCGATGGCGT ACCTACTTAT
AACTTCTGTG TGGTTGTTGA CGATTGGGAT ATGGGGATCA CTTGTGTGGT TCGCGGTGAA
GACCATATCA ACAACACGCC ACGTCAAATC AACATCCTTA AAGCATTAGG CGCGCCTATT
CCTGAATATG CCCACGTGTC GATGATTTTA GGGGATGACG GTGCCAAGTT GTCTAAGCGT
CACGGTGCGG TAAGCGTAAT GCAATACCGT GATGATGGTT ACCTGCCAGA AGCACTGCTT
AACTATTTAG TTCGCTTAGG TTGGTCACAT GGCGATCAAG AAGTGTTCTC TTTAGAAGAA
ATGAAGCAGC TCTTTAAGTT AGACGACATC AACAAAGCGC CTTCGGCTTT TAATACCGAA
AAACTGGTTT GGTTAAACCA ACACTATATT AAGACACTTG ATCCTGAATA TGTGGCTAGC
CATTTACAGT GGCACATGGA CGATCAAAAG ATCGATACCT CAAATGGCCC AGCTTTATCT
GCGGTAGTGA CTGCATTGGC TGAACGCGCT AAGACCTTAA AAGAGTTAGC CGCTTCTAGC
CGTTACTTCT ATGAAGACTT CGCAGAGTTC GATGCTGAGC AAGCGAAAAA GCACTTACGT
GGTGTCGCAC TTGAGCCATT GCAATTAGTG CAACAAAAAC TGGCAGCATT AACTGAGTGG
ACTGTTGAAG CTATCCACCA AGCAATTGAA GCTACCGCGA CCGAATTAGA AGTCGGTATG
GGTAAAGTGG GTATGCCATT ACGTGTCGCT GTGACAGGTG CAGGGCAGTC TCCTGGCTTA
GATATCACCT TATTCTTAAT AGGAAAGGTG CGTTCTGAGC AAAGAATATC CAAAGCGATT
GAATTTGTAG CAGATAGAAT AAATTCCTAA
 
Protein sequence
MTTKTRFAPS PTGFLHVGGA RTALYSWLQA RANNGEFVLR IEDTDIERST QAACDAILEG 
MNWLGLTWDE GPYYQTKRFD RYNEIIAQML EQGTAYKCYC SRERIDALRE AQAANGEAQK
YDGCCRDLPA RDTDEPFVVR FKNPIGGSVV FDDHVRGRIE FSNDALDDLI IARTDGVPTY
NFCVVVDDWD MGITCVVRGE DHINNTPRQI NILKALGAPI PEYAHVSMIL GDDGAKLSKR
HGAVSVMQYR DDGYLPEALL NYLVRLGWSH GDQEVFSLEE MKQLFKLDDI NKAPSAFNTE
KLVWLNQHYI KTLDPEYVAS HLQWHMDDQK IDTSNGPALS AVVTALAERA KTLKELAASS
RYFYEDFAEF DAEQAKKHLR GVALEPLQLV QQKLAALTEW TVEAIHQAIE ATATELEVGM
GKVGMPLRVA VTGAGQSPGL DITLFLIGKV RSEQRISKAI EFVADRINS