Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1365 |
Symbol | gltX |
ID | 4251384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1588908 |
End bp | 1590317 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638117955 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_733500 |
Protein GI | 113969707 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000124879 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0325353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTA AGACGCGTTT TGCCCCAAGC CCAACAGGCT TTTTGCACGT GGGCGGTGCC CGTACAGCTC TTTATTCTTG GTTACAAGCT CGTGCCAATA ATGGCGAGTT TGTTTTACGT ATCGAAGATA CGGATATTGA ACGTTCTACT CAGGCTGCAT GTGATGCCAT TTTAGAGGGC ATGAACTGGT TAGGTCTGAC GTGGGATGAG GGCCCGTACT ATCAAACTAA GCGTTTTGAT CGTTATAACG AAATCATCGC GCAGATGTTA GAGCAGGGCA CAGCTTATAA ATGTTATTGC TCGCGTGAAC GTATCGATGC TTTAAGAGAA GCACAAGCGG CAAATGGCGA AGCACAAAAA TACGATGGTT GCTGCCGTGA CTTGCCGGCG CGTGACACTG ACGAGCCTTT TGTTGTGCGT TTTAAAAACC CCATCGGCGG TTCAGTGGTA TTTGATGACC ATGTCCGTGG CCGTATCGAG TTTTCAAACG ATGCATTAGA TGATCTGATC ATTGCCCGTA CCGATGGCGT ACCTACTTAT AACTTCTGTG TGGTTGTTGA CGATTGGGAT ATGGGGATCA CTTGTGTGGT TCGCGGTGAA GACCATATCA ACAACACGCC ACGTCAAATC AACATCCTTA AAGCATTAGG CGCGCCTATT CCTGAATATG CCCACGTGTC GATGATTTTA GGGGATGACG GTGCCAAGTT GTCTAAGCGT CACGGTGCGG TAAGCGTAAT GCAATACCGT GATGATGGTT ACCTGCCAGA AGCACTGCTT AACTATTTAG TTCGCTTAGG TTGGTCACAT GGCGATCAAG AAGTGTTCTC TTTAGAAGAA ATGAAGCAGC TCTTTAAGTT AGACGACATC AACAAAGCGC CTTCGGCTTT TAATACCGAA AAACTGGTTT GGTTAAACCA ACACTATATT AAGACACTTG ATCCTGAATA TGTGGCTAGC CATTTACAGT GGCACATGGA CGATCAAAAG ATCGATACCT CAAATGGCCC AGCTTTATCT GCGGTAGTGA CTGCATTGGC TGAACGCGCT AAGACCTTAA AAGAGTTAGC CGCTTCTAGC CGTTACTTCT ATGAAGACTT CGCAGAGTTC GATGCTGAGC AAGCGAAAAA GCACTTACGT GGTGTCGCAC TTGAGCCATT GCAATTAGTG CAACAAAAAC TGGCAGCATT AACTGAGTGG ACTGTTGAAG CTATCCACCA AGCAATTGAA GCTACCGCGA CCGAATTAGA AGTCGGTATG GGTAAAGTGG GTATGCCATT ACGTGTCGCT GTGACAGGTG CAGGGCAGTC TCCTGGCTTA GATATCACCT TATTCTTAAT AGGAAAGGTG CGTTCTGAGC AAAGAATATC CAAAGCGATT GAATTTGTAG CAGATAGAAT AAATTCCTAA
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Protein sequence | MTTKTRFAPS PTGFLHVGGA RTALYSWLQA RANNGEFVLR IEDTDIERST QAACDAILEG MNWLGLTWDE GPYYQTKRFD RYNEIIAQML EQGTAYKCYC SRERIDALRE AQAANGEAQK YDGCCRDLPA RDTDEPFVVR FKNPIGGSVV FDDHVRGRIE FSNDALDDLI IARTDGVPTY NFCVVVDDWD MGITCVVRGE DHINNTPRQI NILKALGAPI PEYAHVSMIL GDDGAKLSKR HGAVSVMQYR DDGYLPEALL NYLVRLGWSH GDQEVFSLEE MKQLFKLDDI NKAPSAFNTE KLVWLNQHYI KTLDPEYVAS HLQWHMDDQK IDTSNGPALS AVVTALAERA KTLKELAASS RYFYEDFAEF DAEQAKKHLR GVALEPLQLV QQKLAALTEW TVEAIHQAIE ATATELEVGM GKVGMPLRVA VTGAGQSPGL DITLFLIGKV RSEQRISKAI EFVADRINS
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