| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1356 |
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| Symbol | |
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| ID | 4251375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1573788 |
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| End bp | 1575878 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117940 |
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| Product | hypothetical protein |
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| Protein accession | YP_733491 |
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| Protein GI | 113969698 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0734371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAT TCACATCTAA AAAACTGGCA TACCTAGTAG CATTAACCTT AACCGGTGCA
CTCGTAGGTT GTGGCAGTGA TGGTAAAGAC GGCGCACCAG GCCAACCCGG CGATCCAGGA
CAACCCGGTA AACCCGGAGA CCCATGGACG CCACCACCAG TCACAAGCTC GCTAGTGACC
AATGTTAAAG TACTTGGCTA CAGCTTTGGC GAAGGTAGTA TCACCTATGA ATTTGAAGTC
ACCGACGAAA ACGGCAACTT AGTCAACGGC CTGTTAAACG CTGAAGCCAA AGTCGCCGCT
TTAACGGATA AAGGCTTTAT CAATAACCGC ACCGAAGCGG ACATTAACAA TGTTGCCGAC
AACGTGCATA TCGGCGGCGC GGCGACTCAA GCCACTGAAG GCGCAGAAAT TAAGTCGCTA
GGCGATGGTC ACTACAGCTT TAAAGCACCG ATGAAAGGCG TTAATGCAGG CACTGAAGGC
ATTGTCTGGC TCAGAGTCGG CGGCAACAGC GAAAGCGGTA TTGCGCGCTC TGCGCCAATG
GTGGTGAATA AGCCTGAAGG CACGCATTCA ACCACCACCG ACAGCTGCTA CGCCTGTCAC
GTGGATTACG CCACTAGCCC ACGTCGCCAT GCCAGCTATG TCGCTACAGG TATGGACAGC
GAAGTCACCT TCGTTGAAGG CTGTTTAGTC TGTCACGGCT CGGTAAGCCG CGGCGCGAAA
AACGCAGAAG GCTTCTCAAT CGGCGGTTAC GCCACCAATA CACTGTCTAA AATTGGCCAC
ATTAATCACC AGAAATTCAC TAAAGATTTC AGCGTGATGA ACTGTAGTTC CTGCCACGTT
GAAGCGCCGA CCAATATCAG CGTTTCAGGC CCTGGTTGTA TCGACTGCCA CAACACTGGC
GGCGTACCAG GTGCGATTGT GCCAAGTAAC GGTGCCGATG TACGACCAAT GCATGAAGGC
AAAGAAGGCA TTACCGAGCG TCAAGCTATC CGCGCTAAGT ACCAAGTGAC ACTCTCAACC
CCCGTTAAAG TGGATGATAT TTCCACCTTA ACCGACCACT ATGCGCCCGA TGGCTCAAGC
GTAGCGAAAG TTGAACCCGG TTGGTGTACC ACCATTACTG TGAAAGACAC TGACGGTAAC
ATCTTTAGCA TTAAAGATAA CTTCAACTAC TCAGACCCTC TGGTATTTGA TGCCAAGAAG
CCGATTGTCT ACGCTGGTGC CTATCTGCAT GCCTATGACA ACAACACCTT AGTCGGCCGC
CCAGGTGACC GTACTAAGTA CTACTATGGT TACAACACCG ATGGTACTAA GAATATCTGT
CACCTACTGA CGGATATCAA AGCAGTAAAC GCTAACTATG CCTACTCTGC ACGGGTCACC
TTCGGCACCG CAGGCTGGAT GGAGTACGAC GGTAATCAAC GCTATCAAAG CAATGGTAAC
CTCAGAGCCA ACGGTTATGA CGGTTCAATG GGTGTTTCTT TCACCGCCTA CTCAGATGTG
GTAAATCCAG TAAGCGCTGA GAAAGTATCA GGCTTTGAAC GTCGCAGCGT GATCAGCGAT
AACAGCTGTA CGACTTGCCA TAACGATGCC ACCGCCTTCC ATAAAAACGG TGCATTCGAT
CAAGGCGGTA ACGGTTGTAT TGCCTGTCAC GATAACGGTA TGGCGCGGAC TTCGGCCACT
CTGGGTGCAG GTTTTGGTCC TATGATCCAC AGCTGGCACT GGGGTAATGG TGCGAATGTC
GGTGAGATGA AGGCCGACGG CACCCAAGCC AAGACAGCGA ACGGCGCAGG CGCTATCAAC
CCAGTCACTA GCTGTGTTGC CTGTCACGAA ACCGCTATTG ATTTAAACAA AGTGCCAAAT
CAATACATTC TTGAACCTGG CAGCAAGATG ACCAGCCCTG TTACCGCTAA CTGTTATGCC
TGCCATACTG GCGATGCAGT CAAAGCCCAC ATGGTGAGCA ACGGTGGCGA AATCAGCGTG
CTAGCAACTG GCGATTGGTT CAAGCAACCT ACGGGTGAAT CTTGTGCCGT GTGCCACAAC
ACAGGTAGCA GCTCTGGTAT CGACAAGTAC CATAACTTTA CCCGTAAATA G
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| Protein sequence | MRIFTSKKLA YLVALTLTGA LVGCGSDGKD GAPGQPGDPG QPGKPGDPWT PPPVTSSLVT
NVKVLGYSFG EGSITYEFEV TDENGNLVNG LLNAEAKVAA LTDKGFINNR TEADINNVAD
NVHIGGAATQ ATEGAEIKSL GDGHYSFKAP MKGVNAGTEG IVWLRVGGNS ESGIARSAPM
VVNKPEGTHS TTTDSCYACH VDYATSPRRH ASYVATGMDS EVTFVEGCLV CHGSVSRGAK
NAEGFSIGGY ATNTLSKIGH INHQKFTKDF SVMNCSSCHV EAPTNISVSG PGCIDCHNTG
GVPGAIVPSN GADVRPMHEG KEGITERQAI RAKYQVTLST PVKVDDISTL TDHYAPDGSS
VAKVEPGWCT TITVKDTDGN IFSIKDNFNY SDPLVFDAKK PIVYAGAYLH AYDNNTLVGR
PGDRTKYYYG YNTDGTKNIC HLLTDIKAVN ANYAYSARVT FGTAGWMEYD GNQRYQSNGN
LRANGYDGSM GVSFTAYSDV VNPVSAEKVS GFERRSVISD NSCTTCHNDA TAFHKNGAFD
QGGNGCIACH DNGMARTSAT LGAGFGPMIH SWHWGNGANV GEMKADGTQA KTANGAGAIN
PVTSCVACHE TAIDLNKVPN QYILEPGSKM TSPVTANCYA CHTGDAVKAH MVSNGGEISV
LATGDWFKQP TGESCAVCHN TGSSSGIDKY HNFTRK
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