| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1336 |
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| Symbol | |
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| ID | 4251355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1548990 |
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| End bp | 1549502 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638117920 |
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| Product | copper resistance lipoprotein NlpE |
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| Protein accession | YP_733471 |
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| Protein GI | 113969678 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.534526 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00193123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGCGG TTATCATCAC ACGACAGCCA ATTAATCAAA CGGTTAAGAT GAATATGAAA
CTTTCACAGA TATCACTCGC CCTTCTCGCT TTAATGATTA CCGCATGCAG TGAGCCAGCT
AAGACAGTGG CTAATGAGCC TGTCGCTGCG CCACATCAAG ATACGCAAAC AAACCTACCA
CTTAGCGATA CCAGCCAAAA TGCGCTTGAT TGGCCCGGAG TATATGAAGG CGTTATCCCC
TGTGCAAGTT GCGAAGGGAT CCAAACCACA CTCACGCTCC AAGCGGATAA TAGCTTTGAA
TTAAAGAGTA TTTACTTGGG TAAAGATGAG TCCATCTTTA AAGTGGCAGG AAAATTTGAC
TGGGATAGCA ATGGCTCAAA AATCACCTTA TCCGATGGCA CTAAATACTT GGTAGGGGAA
AACCAACTGT TTATGTTAGA TATGGAAGGT AATCGGGTAA GTGGCGAACT AGCAGAACAT
TACATTTTGA AGAAGAAAGA GATTCAGCTG TGA
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| Protein sequence | MMAVIITRQP INQTVKMNMK LSQISLALLA LMITACSEPA KTVANEPVAA PHQDTQTNLP
LSDTSQNALD WPGVYEGVIP CASCEGIQTT LTLQADNSFE LKSIYLGKDE SIFKVAGKFD
WDSNGSKITL SDGTKYLVGE NQLFMLDMEG NRVSGELAEH YILKKKEIQL
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