Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1332 |
Symbol | |
ID | 4251352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1544281 |
End bp | 1545342 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638117917 |
Product | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
Protein accession | YP_733468 |
Protein GI | 113969675 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | [TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.157987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000128778 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAATACC TCATACCGCT TTTAAGTGTT TTTTGTTTAA CTTGTGTCGC TATCAAGATC TTAAATCCTA TCGCACAGCG TGTTGGTTTA GTTGATTTGC CCAACGAGCG TAAGTTGCAT GAAGGTGCAA TCCCACTGAT TGGTGGGGTT TCTATTTATT GTAGTGTCTT GCTAGTGTCG AGTGTTGTTT TGCCTGAAAG CCAAATCTTT AATTTATATC TCATTTCCGC TGCGTTAATC CTCTTTCTTG GTGTGCTTGA TGATAAGTAT GATTTATCTG TACGTGTGCG GATAGCAGCC CAAGTGATTA CAGCCTCTAT TTTGATTTTT GGGGCAGGGT TATACCTTAC GACATTTGGG CATATTTTGT ACTTTTTTGA GTTTAAACTC GGCTATGTTG GCATTTTTGT AACCACTGTT GCGGTGATAG GTGCTATTAA CGCCTTTAAT ATGGTGGATG GTATTGATGG CTTAGCAGGG ATGTTGAGTC TTGTTACCTT TTCGTCATTA GCTTTTTTGT TCTATTGGGC TGGTAATAGT TGGTTTGTAC TTCCTTTACT ATTCATTGGG GCAATAATAG GATACCTGCT GTTTAACTTG CGTTGGCCAT TCGCATCTTT CGATAAGATT TTCATGGGTG ATGCTGGCAG CATGTTGATT GGTTTAACGG TTGTTTGGTT ATTGGTATTG GGCACGCAAG CTGATAGTAA TCATATACAA CAAGGACAAG TTTTCTCTCC TGTTACGGCA TTGTACCTTA TCGCGATCCC GTTAATGGAT ATGGCTGCGA TTATGTACAG AAGAGTTAAA AAAGGTATGT CGCCATTTAA ACCCGATCGT GATCATTTGC ATCATATTTT TGAGCGCGCG GGTTATAATC GAAAGCAAAC TTTGATCAGG ATATCGCTTG CTTCACTTTT ACTGGCAGTG ATTGGTGTTG GCGCGGATTT GGCTCAAGTT CCCGACTCAA TTATGTTTGT TAGTTTTTTA GCTATTTTTG CGGCTTACAA TTGGGCGCTT GCTAATGTGT GGCAACTTTT GACTTGGTTT AGAAAAGAAT AA
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Protein sequence | MEYLIPLLSV FCLTCVAIKI LNPIAQRVGL VDLPNERKLH EGAIPLIGGV SIYCSVLLVS SVVLPESQIF NLYLISAALI LFLGVLDDKY DLSVRVRIAA QVITASILIF GAGLYLTTFG HILYFFEFKL GYVGIFVTTV AVIGAINAFN MVDGIDGLAG MLSLVTFSSL AFLFYWAGNS WFVLPLLFIG AIIGYLLFNL RWPFASFDKI FMGDAGSMLI GLTVVWLLVL GTQADSNHIQ QGQVFSPVTA LYLIAIPLMD MAAIMYRRVK KGMSPFKPDR DHLHHIFERA GYNRKQTLIR ISLASLLLAV IGVGADLAQV PDSIMFVSFL AIFAAYNWAL ANVWQLLTWF RKE
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