Gene Shewmr4_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1332 
Symbol 
ID4251352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1544281 
End bp1545342 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content40% 
IMG OID638117917 
Productundecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 
Protein accessionYP_733468 
Protein GI113969675 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR02380] undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.157987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000128778 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAATACC TCATACCGCT TTTAAGTGTT TTTTGTTTAA CTTGTGTCGC TATCAAGATC 
TTAAATCCTA TCGCACAGCG TGTTGGTTTA GTTGATTTGC CCAACGAGCG TAAGTTGCAT
GAAGGTGCAA TCCCACTGAT TGGTGGGGTT TCTATTTATT GTAGTGTCTT GCTAGTGTCG
AGTGTTGTTT TGCCTGAAAG CCAAATCTTT AATTTATATC TCATTTCCGC TGCGTTAATC
CTCTTTCTTG GTGTGCTTGA TGATAAGTAT GATTTATCTG TACGTGTGCG GATAGCAGCC
CAAGTGATTA CAGCCTCTAT TTTGATTTTT GGGGCAGGGT TATACCTTAC GACATTTGGG
CATATTTTGT ACTTTTTTGA GTTTAAACTC GGCTATGTTG GCATTTTTGT AACCACTGTT
GCGGTGATAG GTGCTATTAA CGCCTTTAAT ATGGTGGATG GTATTGATGG CTTAGCAGGG
ATGTTGAGTC TTGTTACCTT TTCGTCATTA GCTTTTTTGT TCTATTGGGC TGGTAATAGT
TGGTTTGTAC TTCCTTTACT ATTCATTGGG GCAATAATAG GATACCTGCT GTTTAACTTG
CGTTGGCCAT TCGCATCTTT CGATAAGATT TTCATGGGTG ATGCTGGCAG CATGTTGATT
GGTTTAACGG TTGTTTGGTT ATTGGTATTG GGCACGCAAG CTGATAGTAA TCATATACAA
CAAGGACAAG TTTTCTCTCC TGTTACGGCA TTGTACCTTA TCGCGATCCC GTTAATGGAT
ATGGCTGCGA TTATGTACAG AAGAGTTAAA AAAGGTATGT CGCCATTTAA ACCCGATCGT
GATCATTTGC ATCATATTTT TGAGCGCGCG GGTTATAATC GAAAGCAAAC TTTGATCAGG
ATATCGCTTG CTTCACTTTT ACTGGCAGTG ATTGGTGTTG GCGCGGATTT GGCTCAAGTT
CCCGACTCAA TTATGTTTGT TAGTTTTTTA GCTATTTTTG CGGCTTACAA TTGGGCGCTT
GCTAATGTGT GGCAACTTTT GACTTGGTTT AGAAAAGAAT AA
 
Protein sequence
MEYLIPLLSV FCLTCVAIKI LNPIAQRVGL VDLPNERKLH EGAIPLIGGV SIYCSVLLVS 
SVVLPESQIF NLYLISAALI LFLGVLDDKY DLSVRVRIAA QVITASILIF GAGLYLTTFG
HILYFFEFKL GYVGIFVTTV AVIGAINAFN MVDGIDGLAG MLSLVTFSSL AFLFYWAGNS
WFVLPLLFIG AIIGYLLFNL RWPFASFDKI FMGDAGSMLI GLTVVWLLVL GTQADSNHIQ
QGQVFSPVTA LYLIAIPLMD MAAIMYRRVK KGMSPFKPDR DHLHHIFERA GYNRKQTLIR
ISLASLLLAV IGVGADLAQV PDSIMFVSFL AIFAAYNWAL ANVWQLLTWF RKE