| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1330 |
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| Symbol | |
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| ID | 4251350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1541694 |
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| End bp | 1542860 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638117915 |
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| Product | UDP-glucose 6-dehydrogenase |
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| Protein accession | YP_733466 |
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| Protein GI | 113969673 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.143594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000414466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAATTG CTATTGCTGG TACAGGTTAT GTAGGTTTAT CTAATGCTGT GCTTTTGGCA
CAGTACCATC AAGTTACTGC GGTTGATGTT ATCGCGGGTA AAGTGGAGTT AATTAACGCT
CGCAAATCAC CGATTGTTGA TGCTGAAATT GAAGAATATC TGGCGCAGCG CGAGCTTAAT
TTAACCGCGA CCTTGGATAA ACAACTGGCG TATGAAGATG CTGATTTTGT AATTATTGCT
ACGCCAACGG ATTACGATCC AAAAACGAAT TATTTTAACA CTTCTACTGT TGAGTCGGTC
ATTCAAGATG TGTTAGCCAT TAACCCTAAT GCGGTGATGG TGATTAAAAG CACAGTACCG
GTTGGTTTTA CCGCCAAGGT TAAGCAAAAG TTCCAGTGCG AAAATATTTT ATTCTCCCCA
GAGTTTTTGC GTGAGGGGAA AGCGCTTTAC GATAACTTGC ATCCATCGCG GATTATTGTC
GGTGAGCGTA GCGAGCGCGC AAAAATATTT GCTGATTTAT TAGTGCAAGG CGCAGTGAGA
AAAGATATTG AAGTTTTATT TACTGATTCG ACCGAGGCCG AAGCGGTTAA ATTATTCTCT
AATACTTATC TTGCGATGCG TGTAGCTTAC TTTAATGAGC TTGATACTTA TGCTGAGACT
CATGGTTTAG ATTCGCGCCA AATAATCGAA GGTGTGTGTT TAGATCCACG TATTGGTAAT
CACTACAATA ATCCATCCTT TGGTTATGGT GGTTACTGTT TACCTAAAGA TACTAAGCAA
TTACGGGCTA ATTATGCAGA TGTACCTAAT AGCATTATTG GCGCTATCGT TGAGTCAAAC
ACGACCCGTA AAGATTTTAT TGCTGACTCT ATTTTAAGCC GCAACCCTAA GGTTGTGGGG
ATTTATCGCC TAATTATGAA GTCGGGTTCG GATAACTTTC GCGCCTCCAG CATTCAAGGC
ATTATGAAGC GCCTTAAAGC TAAAGGCATT GAGGTCATTG TGTATGAGCC AGTACTTAAA
GAGAAAGAGT TTTTCCATTC TCGTGTTGTG ACAGATTTGA CCGCTTTCAA AGCGGTTGCC
GATGTGATTG TGTCTAACCG TATGGCTAAA GAGTTAGCCG ATGTGGCGGA TAAGGTTTAT
ACGCGCGATT TGTTTGGAAG TGATTGA
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| Protein sequence | MKIAIAGTGY VGLSNAVLLA QYHQVTAVDV IAGKVELINA RKSPIVDAEI EEYLAQRELN
LTATLDKQLA YEDADFVIIA TPTDYDPKTN YFNTSTVESV IQDVLAINPN AVMVIKSTVP
VGFTAKVKQK FQCENILFSP EFLREGKALY DNLHPSRIIV GERSERAKIF ADLLVQGAVR
KDIEVLFTDS TEAEAVKLFS NTYLAMRVAY FNELDTYAET HGLDSRQIIE GVCLDPRIGN
HYNNPSFGYG GYCLPKDTKQ LRANYADVPN SIIGAIVESN TTRKDFIADS ILSRNPKVVG
IYRLIMKSGS DNFRASSIQG IMKRLKAKGI EVIVYEPVLK EKEFFHSRVV TDLTAFKAVA
DVIVSNRMAK ELADVADKVY TRDLFGSD
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