Gene Shewmr4_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1316 
Symbol 
ID4251336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1525977 
End bp1526330 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content36% 
IMG OID638117901 
Producthypothetical protein 
Protein accessionYP_733452 
Protein GI113969659 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0254819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCG AACAACTGGA TGTTTGGAAA AGAGCTTCGA GATTATCTTG TCAAATATAT 
CAAGTGACAG AATTAGTAAG TAATTGGGGT TTTAAAGATC AAATAACCCG TTCAGGATTA
TCTGTCCCTT CAAATATTGC TGAGGGTGAA GAGCGTGAAA CACTAAAAGA TCAAATTCGC
TTTTTGTACT ATGCCAAAGG CTCTCTAGGA GAGCTAGTCA CCCAACTTTA TATAGGTATT
GAAGTTGGAT ATTTGGCAAA GGAACCCGCG TTACTTATGG TTCAAGAAGC AAAAGAATTA
GCCAAAATCT TAGGTGCAAT TATCAAACAA AAGCAAAGTA AGAGTAAAAG CTAA
 
Protein sequence
MRFEQLDVWK RASRLSCQIY QVTELVSNWG FKDQITRSGL SVPSNIAEGE ERETLKDQIR 
FLYYAKGSLG ELVTQLYIGI EVGYLAKEPA LLMVQEAKEL AKILGAIIKQ KQSKSKS