Gene Shewmr4_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1307 
Symbol 
ID4251327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1514258 
End bp1514752 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content46% 
IMG OID638117892 
ProductCheW protein 
Protein accessionYP_733443 
Protein GI113969650 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.897711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATA CAAGAAATGT CGCGGCCGTG GCTGCAAGTA AAGATGATGC AGTATTGCAA 
TGGGTTACCT TTAAGTTAGA CAACGAAACT TATGGTATCA ATGTGATGCA GGTGCAAGAG
GTATTGCGTT ACACCGAGAT TGCCCCTGTG CCTGGCGCAC CCCATTACGT TTTAGGGATT
ATTAACCTAC GTGGCAATGT GGTGACCGTT ATCGATACTC GCTCACGTTT TGGCTTGCAA
TCGGCGGAAG TGGATGATTC GACTCGTATC GTGATTATCG AAGCAGAGAA ACAAGTGATC
GGTATTTTGG TGGATAGTGT GGCCGAAGTG GTTTATCTGC GCCGCTCTGA AATTGATAAT
GCGCCGAATG TCGGCACCGA AGAAAGCGCC AAGTTTATCC AAGGCGTGAG CAATCGCGAT
AATGAGCTAC TGATCCTCGT CGACTTAGAC AAGTTATTAT CCGATGAAGA ATGGGCAGAG
TTAAATCAGC TCTAA
 
Protein sequence
MKDTRNVAAV AASKDDAVLQ WVTFKLDNET YGINVMQVQE VLRYTEIAPV PGAPHYVLGI 
INLRGNVVTV IDTRSRFGLQ SAEVDDSTRI VIIEAEKQVI GILVDSVAEV VYLRRSEIDN
APNVGTEESA KFIQGVSNRD NELLILVDLD KLLSDEEWAE LNQL