Gene Shewmr4_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1298 
Symbol 
ID4251231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1505675 
End bp1506556 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content48% 
IMG OID638117883 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_733434 
Protein GI113969641 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0455] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.206017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG ATCAAGCAAG TGGTTTACGT ATGATGAATC AACCCTATAA CGAAAAAGTG 
AAAGTAATCG CGGTTACGGG TGGTAAAGGT GGCGTGGGTA AAACCAGTGT GTCCATCAAT
ACCGCTGTAG CATTAGCCGA AAAGGGCAAG CGTGTCTTAG TGCTTGATGC CGACTTAGGC
TTGGCAAACG TCGATGTCAT GTTAGGGATC CGTGCTGAAC GTAACCTTTC CCATGTACTC
TCAGGCGATG CTGAGCTGGA TGATATTATT GTCCGTGGTC CTAAGGGCAT AGGCATTGTC
CCCGCGACCT CGGGTACTCA AGGCATGGTA GAGTTGAGCC CTGCGCAACA TGCGGGCTTA
ATTCGTGCTT TCAGTGAGAT GCGTACCCAG TTTGATATTC TCATCGTGGA TACTGCCGCG
GGGATTTCTG ACATGGTACT CAGTTTCTCT CGCGCGTCAC AGGATGTGTT GGTTGTTGTT
TGTGACGAGC CAACCTCCAT CACTGACGCT TATGCGTTAA TCAAAATTCT CAGCCGTGAA
CACGGCGTTT TCCGCTTTAA AATTGTTGCG AATATGGTGC GCAGTTTACG CGAAGGTATG
GAATTGTTTG CTAAACTCAG TAAAGTGACC GACAGATTCT TGGACGTGGC ACTTGAACTG
GTTGCGACCA TTCCATTTGA TGAAAACCTT CGCAAATCAG TGCGTAAACA AAAGTTAGTG
GTTGAGGCTT ATCCTAAGTC TCCAGCTGCG ATAGCGTACC ATGGCCTAGC GAATAAGATC
ATGAGTTGGC CAGTACCACA GCAACCTGGT GGGCATTTGG AGTTTTTCGT TGAGCGTTTA
GTTCAGCGAC CAGATTTTCA AGAGGAAAAA ACGAGTGAAT AA
 
Protein sequence
MTLDQASGLR MMNQPYNEKV KVIAVTGGKG GVGKTSVSIN TAVALAEKGK RVLVLDADLG 
LANVDVMLGI RAERNLSHVL SGDAELDDII VRGPKGIGIV PATSGTQGMV ELSPAQHAGL
IRAFSEMRTQ FDILIVDTAA GISDMVLSFS RASQDVLVVV CDEPTSITDA YALIKILSRE
HGVFRFKIVA NMVRSLREGM ELFAKLSKVT DRFLDVALEL VATIPFDENL RKSVRKQKLV
VEAYPKSPAA IAYHGLANKI MSWPVPQQPG GHLEFFVERL VQRPDFQEEK TSE