Gene Shewmr4_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1284 
SymbolfliH 
ID4251217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1491956 
End bp1492906 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content49% 
IMG OID638117869 
Productflagellar assembly protein H 
Protein accessionYP_733420 
Protein GI113969627 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCT CTAATCGGAG TGACAATAGC GACAATAAAT TGTCCCATAG GGTGGTGAGT 
GACTCTGAAA TTGAGTTCAG CCATTGGCAA TTACCCGATG TCACTGAAAC CGAAGAGGCG
AGTATTTCTA ACCTGTTTGG TTATTCTGCC CAGCAGCATG CGCCCAAGGC GGTGGCAGCC
GAAACTATTG CGCCACCCAC CATGGCGGAA ATTGAAGATA TTCGCGCCCA GGCTGAAGAA
GAAGGCTTTA ACGAAGGTAA GACGCAAGGT TATGCCGAAG GGCTAGAGCA GGGCAGACTC
GAGGGGCTGG AGCAAGGTCA TACCGAGGGC CTAGTCCAAG GCCATGAGCA AGGGCTCGAG
GCAGGGCTTG CCGAAGCTAA AACCTTAATC CAACGCTTTG AAGGGCTGTT AAGTCAATTT
GAAAAGCCTT TGCAATTACT CGATGGCGAT ATTGAACATT CCTTAATGAC ACTCACTATG
GCGCTGGCTA AATCTGTGAT TGGTCATGAA CTTAAAACTC ATCCTGAACA AATCCTGTCG
GCGCTACGTT TAGGGGTTGA ATCTCTGCCA ATCAAGGAGC AAAGCGTCAG TATTCGCATG
CATCCCGATG ATGTTGCCTT GGTGGAACAG TTATATACCA GTACTCAATT GAACCGTAAC
CAATGGCAAT TAGAGGCCGA ACCTAGCTTA AATCCGGGGG ATTGTATTAT CAGCAGCCAA
CGTTCGTTGG TGGATTTAAC TCTTTCCTCA CGCATCGATA CTGTGTTTGA GTCATTACGT
AATCAACAAT CCCATTTAAG TCATCAGCAG CAACAGCGTC AAGCGGTCCT CGACGAGGAG
AATGCCGCTA AAATCGTCTC AGCCGCAGAA CTTGCTGAAG CGGCGCAAAG TCCCCAACCC
CAAGATGATG GAGAGCAAGA TGCTAAATCG CCGCCATCAA CTGCTGAATA A
 
Protein sequence
MSSSNRSDNS DNKLSHRVVS DSEIEFSHWQ LPDVTETEEA SISNLFGYSA QQHAPKAVAA 
ETIAPPTMAE IEDIRAQAEE EGFNEGKTQG YAEGLEQGRL EGLEQGHTEG LVQGHEQGLE
AGLAEAKTLI QRFEGLLSQF EKPLQLLDGD IEHSLMTLTM ALAKSVIGHE LKTHPEQILS
ALRLGVESLP IKEQSVSIRM HPDDVALVEQ LYTSTQLNRN QWQLEAEPSL NPGDCIISSQ
RSLVDLTLSS RIDTVFESLR NQQSHLSHQQ QQRQAVLDEE NAAKIVSAAE LAEAAQSPQP
QDDGEQDAKS PPSTAE