Gene Shewmr4_1277 details

Gene Information

• Locus tag: Shewmr4_1277
• Symbol: fliS
• ID: 4251210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-4
• Kingdom: Bacteria
• Replicon accession: NC_008321
• Strand: +
• Start bp: 1484028
• End bp: 1484429
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 638117862
• Product: flagellar protein FliS
• Protein accession: YP_733413
• Protein GI: 113969620
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1516] Flagellin-specific chaperone FliS
• TIGRFAM ID: [TIGR00208] flagellar biosynthetic protein FliS

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 0.781333
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTGGTT CAATGCAATC ATATCGAAAA GTCTCAGTGG AAAGCGATCT AGGCGTTGCT 
TCTCCTCATC GCATTATTCA AATGTTATTT GCGGGTGCAT TGGAACGTTT AGCTCAAGCA 
AAATGCGCTA TTGAACAGGG TAATATTGCT CAACGTGGTC TTTTTCTCGG TAAAGCCATC 
GGTATTGTCT CCGGGTTAAA CAGCAGCTTA AATATGGATG CTGAAGGTGA CGTTGCTACA 
AACTTAACAA GATTGTATGA CTATATGCTG CGAAGAATGT CTGAGGCGAA CATCAACAAT 
GATGTGCAGG CGATTGATGA AGTTGTGGCT ATTTTAAAGA CCATCAAAGA AGGTTGGGAT 
GCTATTCCTG CGGATAAACA CAATATCACA TCTCATACAT AA 

 

Protein sequence

MRGSMQSYRK VSVESDLGVA SPHRIIQMLF AGALERLAQA KCAIEQGNIA QRGLFLGKAI 
GIVSGLNSSL NMDAEGDVAT NLTRLYDYML RRMSEANINN DVQAIDEVVA ILKTIKEGWD 
AIPADKHNIT SHT