| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1275 |
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| Symbol | |
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| ID | 4251208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1482264 |
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| End bp | 1483631 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638117860 |
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| Product | flagellar hook-associated 2 domain-containing protein |
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| Protein accession | YP_733411 |
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| Protein GI | 113969618 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1345] Flagellar capping protein |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.427592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTAA CATCGGTTGG TATTGGTTCT GGCATGGATA TCGGTGGCAT AGTCACAGCG
TTAGTGAATG CTGAAAGTGC CGGTAAAATT GCTAAGTTTG ATGTCAATGA AGGTAAGCTT
AATGCGCAAA TTTCGGGTAT TGGCGCATTA AAAAGTGCCA TGTCTGAATT TAACGATAAA
TTAAAAACGC TCGCTAAGGC CGAAACCTTT GGTAGTCAAA AGGTTGTGAC TTCCTCAAAA
GATTATCTCT CTGCCACTGT AGATAAAACC GCGGTTTCTG GCACTTATCA AATTAAAGTC
GAGCAATTGG CTCAAAGCCA GAAAGTCGGC ACAGCTGTAG CTACAGATAC AACCTCACCG
ATAGGTGAAG GAGCTTTATC CATTAAGGTG GGAAGTGGAA CAGCTTTTAA TATTGATGTC
TCCGCTACTG ACTCCCTAAC CGATATTATG AATAAGATTA ATAAATCTGA TGATAATACC
GATGTTACTG CCACCATAGT AAATGGGGAG CTGGGGCCTC AGCTGGTGTT AGGTTCCAAG
AAGACTGGTG AGGATAACCA GATTTCAGTA ACTGCAACGG ATAGCGGAGC GGGTACTGGT
TTGTCAGATA CCTTTACGAT GAGTGAAGTC ACGCCCGCCA AAAACGCAAT AGTGTATGTC
GATGGCGTAA AGGTGGTTTC AGACTCCAAT ACACTTGATA AGGCCATTAC TGGCGTTTCA
TTAACCTTAA CCGCCGCCGA TGTAGATAAA ACGACAACAA TGACCGTGAG TAAAGATACG
GCGAAAACGA AAACTGCGAT AGAGGGGTTT GTTGAGTCCT ATAACAGTTT GATGACCACA
ATTCAGAACC TCACTAAATA TGATGCCGAT ACAAAGCAGG CTGGGATATT ACAAGGTGAT
GCCTTACCCC GTAGCATTCA GAGCCAATTA CGTACTATGG TTTCAAGCGA GTTTGATACT
TCAGACGGAA AACAGGTGCT CGCAAATTTA GGGATAAAAA CGACTCGTGA AGGATTGTTG
GAAATTGATT CGACTAAATT AACTGAGTCA TTGAAAAATG ACAAGGGGAC AATTAGCGAG
TTATTTACCT CTGAGAATAC GGGACTTTCG GCGAAAATGT CTGGTTTGGT AGATACTTAT
ATAAAATCTG GCGGTATTAT CGATGGGCGG GATAATTCCC TTGATGAACA ACTCGCCCGT
ATTGCCGATA GTCGAGAGCA GCTAAGCACT CGGATGGCCG CTTACAGCGA TCGCTTATAT
AAGCAATTTA ATGCTATGGA TTTGGTTGTG GCAAATCTGA ACTCTCAATC CAGCATGTTG
TTATCACGTT TAGATTCATT GCCTGGTGTT GTTCGACAGA ATAAATAG
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| Protein sequence | MGLTSVGIGS GMDIGGIVTA LVNAESAGKI AKFDVNEGKL NAQISGIGAL KSAMSEFNDK
LKTLAKAETF GSQKVVTSSK DYLSATVDKT AVSGTYQIKV EQLAQSQKVG TAVATDTTSP
IGEGALSIKV GSGTAFNIDV SATDSLTDIM NKINKSDDNT DVTATIVNGE LGPQLVLGSK
KTGEDNQISV TATDSGAGTG LSDTFTMSEV TPAKNAIVYV DGVKVVSDSN TLDKAITGVS
LTLTAADVDK TTTMTVSKDT AKTKTAIEGF VESYNSLMTT IQNLTKYDAD TKQAGILQGD
ALPRSIQSQL RTMVSSEFDT SDGKQVLANL GIKTTREGLL EIDSTKLTES LKNDKGTISE
LFTSENTGLS AKMSGLVDTY IKSGGIIDGR DNSLDEQLAR IADSREQLST RMAAYSDRLY
KQFNAMDLVV ANLNSQSSML LSRLDSLPGV VRQNK
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