| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1267 |
|---|
| Symbol | flgJ |
|---|
| ID | 4251201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1473082 |
|---|
| End bp | 1474236 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638117853 |
|---|
| Product | flagellar rod assembly protein/muramidase FlgJ |
|---|
| Protein accession | YP_733404 |
|---|
| Protein GI | 113969611 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1705] Muramidase (flagellum-specific) |
|---|
| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TTTCAAGTTC ATCACATTTT CTTGATCTGG GCGGGCTCGA CTCCCTGCGC
GCCCAGGCTC AGAAAGATGA GAAGGGCGCC TTGAAAAAAG TCGCCCAACA ATTTGAAGGC
GTTTTCGTGC AAATGCTGAT GAAGAGCATG CGTGACGCCA ACGCAGTGTT TGAATCCGAC
AGCCCACTCA ACAGCCAATA CACTAAATTT TATGAGCAAA TGCGGGACCA GCAGTTATCC
GTCGATTTAT CGGATAAAGG TGTGCTGGGC CTTGCAGACA TGATGGTGCA GCAATTATCC
CCCGAGTCGA GTCAGTTTAC GCCCGCATCC GTGCTGCGTA ATGACGGTGG TATGAAGCTG
CAACATGATG CGAAAGCCTT CAATATTCCA GCTCAAGCAA CCTCGGCAGC TGAAACTCAA
ACTGCGGCTG CGCCAGTCGT TGCCGCGCAA GGTGTTCCGG CATCGATTGC ACGCCCAAGT
GCTAACGTGG ATAACGGCGA TGGCGTGACG TCCTCCTTAG ATATTGATAG ACCTGAGCGT
TTGCTGGCCA TAGATACGCC AAAGCCCGCT TGGTCAGAGC AACCCTTATC GCCAATCGAA
CCTGTGATCA GTGGCCAAAT CTTGCCGACG GCGGCATTTA GGGAAACACA AAAGACCCTC
AAATTTGGTA GTCGGGAAGA GTTTTTGGCG ACCCTCTATC CTCATGCAGA AAAAGCCGCC
AAAGCCCTTG GCACTCAACC CGAAGTGCTC TTGGCACAGT CAGCCCTTGA GACGGGCTGG
GGTCAAAAAA TTGTCCGTGG CAATAATGGC GCGCCAAGCC ATAACCTGTT CAATATTAAA
GCCGATCGTC GCTGGCAAGG TGATAAGGCT AACGTGAGTA CCTTGGAATT TGAGCAGGGT
ATTGCCGTTA GACAAAAAGC CGATTTTAGG GTGTATGCCG ATTTCGAGCA CAGTTTTAAC
GATTTTGTTT CCTTTATTGC TGAGGGTGAG CGTTATCAGG CGGCGAAGAA AGTCGCGGCG
TCACCAACTC AGTTTATTCG AGCATTACAG GATGCTGGTT ATGCCACCGA TCCTAAATAT
GCTGAAAAAG TCATTAAAGT TATGCAGTCC ATCAGCGAAG AGCTGAAATC GATACTGCCA
GGAGAAGACA AATGA
|
|---|
| Protein sequence | MEKLSSSSHF LDLGGLDSLR AQAQKDEKGA LKKVAQQFEG VFVQMLMKSM RDANAVFESD
SPLNSQYTKF YEQMRDQQLS VDLSDKGVLG LADMMVQQLS PESSQFTPAS VLRNDGGMKL
QHDAKAFNIP AQATSAAETQ TAAAPVVAAQ GVPASIARPS ANVDNGDGVT SSLDIDRPER
LLAIDTPKPA WSEQPLSPIE PVISGQILPT AAFRETQKTL KFGSREEFLA TLYPHAEKAA
KALGTQPEVL LAQSALETGW GQKIVRGNNG APSHNLFNIK ADRRWQGDKA NVSTLEFEQG
IAVRQKADFR VYADFEHSFN DFVSFIAEGE RYQAAKKVAA SPTQFIRALQ DAGYATDPKY
AEKVIKVMQS ISEELKSILP GEDK
|
|---|
| |