Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1257 |
Symbol | |
ID | 4251313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1464508 |
End bp | 1465428 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638117843 |
Product | response regulator receiver modulated CheW protein |
Protein accession | YP_733394 |
Protein GI | 113969601 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGTA TTCTTGATTC AGTCAACAAA CGCACCCAGC TCGTAGGTCA AAACCGACTA GAATTATTGC TATTTAAGTT AAATGGTCGT CAGCGATTTG GGATTAACGT ATTCAAAGTA AAAGAGGTTC TGCAGTGCCC GCCATTAACG GCTTTACCTA AGCTTAACCC CTACGTTAAG GGGGTTGCCC ATATTCGCGG AACGACTATC TCAGTCATCG ATTTGAGCGC TGCAACTGGC GGACGTCCGT TAGCGAGTAC CGAAAATTGC TTTATCATCA TTTCAGAATA TAACCGCAGC GTACAAGGTT TCTTGGTCAG TTCAGTTGAG CGTATTATCA ATATGAATTG GGAAGCCATT ATGCCGCCAC CGCAAGGTGC TGGCCGTTAT TCTTATTTAA CAGCAGTGAC TGAAATTGAA GGAGAATTAG TCGAAATCCT TGATGTTGAA AAGATTTTAG ATGAAATTTC CCCGGTGAAA ACCGCGATCA GTGAAGAAGT AAATGAGCAA CTCACAATCG ATAGAAGTCA ACATTATCAC ATTATGGTGA TTGATGATTC TGCGGTTGCT CGTAAGCAAA TTATTCGCGC ACTTGAGTCG TTAAACTTAC AGATTGATAC GGCAAAAGAT GGCCGCGAAG CATTGGATAA GTTGAAGACT ATCGCTGCCG AAATGAACAA TGTTGCCGAA GAAATTCCAT TGATTATTTC TGATATTGAA ATGCCGGAAA TGGATGGTTA TACCTTAACG GCAGAGATCC GTGACGATCC AAAGCTTAAA CATATCAAGG TCGTTTTGCA CACTTCATTA AGCGGCGTCT TCAACCAAGC TATGGTACAA AAAGTGGGCG CCAACGACTT TATCGCCAAA TTCAATCCCG ATGAATTAGC AGCGGCAGTG AACAAGCATT TAAGTTTGTA G
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Protein sequence | MSSILDSVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT ALPKLNPYVK GVAHIRGTTI SVIDLSAATG GRPLASTENC FIIISEYNRS VQGFLVSSVE RIINMNWEAI MPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TAISEEVNEQ LTIDRSQHYH IMVIDDSAVA RKQIIRALES LNLQIDTAKD GREALDKLKT IAAEMNNVAE EIPLIISDIE MPEMDGYTLT AEIRDDPKLK HIKVVLHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV NKHLSL
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