Gene Shewmr4_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1257 
Symbol 
ID4251313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1464508 
End bp1465428 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content42% 
IMG OID638117843 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_733394 
Protein GI113969601 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGTA TTCTTGATTC AGTCAACAAA CGCACCCAGC TCGTAGGTCA AAACCGACTA 
GAATTATTGC TATTTAAGTT AAATGGTCGT CAGCGATTTG GGATTAACGT ATTCAAAGTA
AAAGAGGTTC TGCAGTGCCC GCCATTAACG GCTTTACCTA AGCTTAACCC CTACGTTAAG
GGGGTTGCCC ATATTCGCGG AACGACTATC TCAGTCATCG ATTTGAGCGC TGCAACTGGC
GGACGTCCGT TAGCGAGTAC CGAAAATTGC TTTATCATCA TTTCAGAATA TAACCGCAGC
GTACAAGGTT TCTTGGTCAG TTCAGTTGAG CGTATTATCA ATATGAATTG GGAAGCCATT
ATGCCGCCAC CGCAAGGTGC TGGCCGTTAT TCTTATTTAA CAGCAGTGAC TGAAATTGAA
GGAGAATTAG TCGAAATCCT TGATGTTGAA AAGATTTTAG ATGAAATTTC CCCGGTGAAA
ACCGCGATCA GTGAAGAAGT AAATGAGCAA CTCACAATCG ATAGAAGTCA ACATTATCAC
ATTATGGTGA TTGATGATTC TGCGGTTGCT CGTAAGCAAA TTATTCGCGC ACTTGAGTCG
TTAAACTTAC AGATTGATAC GGCAAAAGAT GGCCGCGAAG CATTGGATAA GTTGAAGACT
ATCGCTGCCG AAATGAACAA TGTTGCCGAA GAAATTCCAT TGATTATTTC TGATATTGAA
ATGCCGGAAA TGGATGGTTA TACCTTAACG GCAGAGATCC GTGACGATCC AAAGCTTAAA
CATATCAAGG TCGTTTTGCA CACTTCATTA AGCGGCGTCT TCAACCAAGC TATGGTACAA
AAAGTGGGCG CCAACGACTT TATCGCCAAA TTCAATCCCG ATGAATTAGC AGCGGCAGTG
AACAAGCATT TAAGTTTGTA G
 
Protein sequence
MSSILDSVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT ALPKLNPYVK 
GVAHIRGTTI SVIDLSAATG GRPLASTENC FIIISEYNRS VQGFLVSSVE RIINMNWEAI
MPPPQGAGRY SYLTAVTEIE GELVEILDVE KILDEISPVK TAISEEVNEQ LTIDRSQHYH
IMVIDDSAVA RKQIIRALES LNLQIDTAKD GREALDKLKT IAAEMNNVAE EIPLIISDIE
MPEMDGYTLT AEIRDDPKLK HIKVVLHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV
NKHLSL