Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1256 |
Symbol | flgA |
ID | 4251312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1463595 |
End bp | 1464302 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638117842 |
Product | flagellar basal body P-ring biosynthesis protein FlgA |
Protein accession | YP_733393 |
Protein GI | 113969600 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA ATTTAGTCTA TTTTTTGTGT GTTCTCGCAT TATTTCTCGC CACGGCCGCC AATGCAGCGC CTGTGGTACC TAGCGTATCG GCGATATCCG AGCTCGCTAA AGCCCTTATT AATGAAAAGA TTTCAGTACC ATCGAATGCC AAAGTGGAAA TTGCTCCACA ACCCATAGAT AAACGAACAC TGCCAGCACA ATGTGCTTCT CCCATCAAAG TTGAGCTGGC ATCTGATCGG GAAATCAGCC GCAACAACAC GGTAAAAGTC AGCTGTGATA CACCCGACTT AGCCTATCCT TGGCAAATTT TTATGTCAGT TCGCGTCGAT ATCCTGTTCC CTGTTGTGGT CGCCAGCGAA ACATTGGCAC CGGGTGAATT AATCAACCCA AGTCAGGTTG AAATTCGTTA TGTCGATCAA AACAGTTTAC GCGGTATGCA ATTTAGCGAT ACAAACCAAA TTTCAGGTGT AAGGGTTAAA CGCCGTGTCG CCAAACACTT CCCCATTTTT GCTAACAATC TTTGTTTTGT TTGTAAGAAT GATTCAGTAT CGATTTATGT TCGTTCCAGT AATTTTGTGC TAAAAACCGT GGGTGAAGCA TTGCAAGATG GTAATATTGG TGACCAAATT AGGGTCAAAA ATAGCAGCTC AAACAAGGAA CTAGATGCTA TAGTCACAGC CATTGGCGAA GTCGAAGTTA GAATGTAA
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Protein sequence | MKVNLVYFLC VLALFLATAA NAAPVVPSVS AISELAKALI NEKISVPSNA KVEIAPQPID KRTLPAQCAS PIKVELASDR EISRNNTVKV SCDTPDLAYP WQIFMSVRVD ILFPVVVASE TLAPGELINP SQVEIRYVDQ NSLRGMQFSD TNQISGVRVK RRVAKHFPIF ANNLCFVCKN DSVSIYVRSS NFVLKTVGEA LQDGNIGDQI RVKNSSSNKE LDAIVTAIGE VEVRM
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