Gene Shewmr4_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1247 
Symbol 
ID4251303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1456956 
End bp1457576 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID638117832 
ProductTetR family transcriptional regulator 
Protein accessionYP_733384 
Protein GI113969591 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGT CCTTCGATAT CCCGATGAGC CGCAGTGAAC AAAAGAAACA GCAAGTGCTG 
GTGGCGGCCA TTGATTTGTT TTGTCGCCAA GGATTTCCCC ACACCAGCAT GGATGAAGTG
GCGAAACAGG CGGGCGTGTC CAAACAAACG GTGTACTCCC ACTACGGCAG TAAAGATGAT
TTGTTTGTGG CGGCGATTGA ATCCAAATGC GTTGGCCATA ACTTAAATGC CGACTTACTC
AGTGACCCAA GCCAACCCGA AGCGACCCTC ACCGAATTTG CGCTGCAATT TGGCGAAATG
ATCGTTAGCC CTGAGGCGAT TACCGTATTT AAAGCCTGTG TGGCGCAATC TGAGAGCCAC
CCTGAAGTTT CAAGGTTGTT TTTTGAGGCG GGGCCACAGC ATATGCTTGC GATGCTGACA
AAATATTTAG GGGCGGTTGA AGCGCTTGGA GTGTATCGCT TTTCACAACC GCATCACTGC
GCGGTACGTT TGTGTTTAAT GTTGTTTGGT GAGTTGAAAC TCAGGTTAGA GCTGGGACTG
GAGACGGAGA GCTTATTGGG GGAGCGTGAG CAGTATATTC GGGGTTGTGC CGAGATGTTC
TTAAAAGCTT ATCGGGTGTA A
 
Protein sequence
MTQSFDIPMS RSEQKKQQVL VAAIDLFCRQ GFPHTSMDEV AKQAGVSKQT VYSHYGSKDD 
LFVAAIESKC VGHNLNADLL SDPSQPEATL TEFALQFGEM IVSPEAITVF KACVAQSESH
PEVSRLFFEA GPQHMLAMLT KYLGAVEALG VYRFSQPHHC AVRLCLMLFG ELKLRLELGL
ETESLLGERE QYIRGCAEMF LKAYRV