Gene Shewmr4_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1210 
Symbol 
ID4251249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1410348 
End bp1411172 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content50% 
IMG OID638117795 
Producthypothetical protein 
Protein accessionYP_733347 
Protein GI113969554 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.749263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAG TCTTCATTAT CTTAACGCTG GGTCTCGGTG CTATCGCTTG GCTGGCCTCG 
AGCCGCTGGC GCAAAACGCT TCACCGAAAG CGCGTGATTA CCAGCGCATT TCCTAAGGCT
TGGCGAGCGA TTTTGAAAAA GAGATTGCCC TACTTCCACG CCTTACCCGC GGATCTTCAA
CTACAACTCA AGCGCCACAT CCAAGTTTTT TTGGATGAGA AACGATTCGT CGGTTGCGAT
GGACTACAGA TAACCGATGA AATTCGCGTC ACTATTGCCG CCCAAGCCTG CCTGCTACTC
CTTAATCGCA ACACTGATTT TTACCCCAAT CTTAGGCAGA TTTTGGTCTA TCCCGACGCC
TTTATTGTCG ACAGTCAACG CCAAGATCCC GCAGGCTTAA TCTGGGAGCA ACGCAATGTG
CTGGCGGGAG AATCCTGGGA GCAAGGCCAA GTGATACTGT CATGGAAGAA TACTCTCGAA
GGCGCAGCGA ATCCCCATGA TGGCAACAAT GTAGTGATCC ACGAGTTTGC CCATCAATTA
GATCAAGAAG ATGGCCATGC CAATGGCGCG CCGATTTTAC AACACCGTCA GGATTACCTG
TCCTGGTCGA GCGTATTCAG TCAGGCATTT AATGAATTAG TCCAAGCTGC CGCCCTTGGC
CGTCCTTCCC TATTTAATTA CTATGGGGCG ACCAATCCGG CGGAATTTTT TGCCGTGGTG
ACCGAGGTCT TTTTTGAAAA GCCAGAAGCG CTTAATCTTG AACATCCCGC TCTTTATCGC
GAGTTGAGCC ATTTTTATCA ACTCGATCCG ATAAACTGGC GTTGA
 
Protein sequence
MLAVFIILTL GLGAIAWLAS SRWRKTLHRK RVITSAFPKA WRAILKKRLP YFHALPADLQ 
LQLKRHIQVF LDEKRFVGCD GLQITDEIRV TIAAQACLLL LNRNTDFYPN LRQILVYPDA
FIVDSQRQDP AGLIWEQRNV LAGESWEQGQ VILSWKNTLE GAANPHDGNN VVIHEFAHQL
DQEDGHANGA PILQHRQDYL SWSSVFSQAF NELVQAAALG RPSLFNYYGA TNPAEFFAVV
TEVFFEKPEA LNLEHPALYR ELSHFYQLDP INWR