| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1204 |
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| Symbol | |
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| ID | 4251243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1404670 |
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| End bp | 1405263 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117789 |
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| Product | thiol peroxidase (atypical 2-Cys peroxiredoxin) |
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| Protein accession | YP_733341 |
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| Protein GI | 113969548 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2077] Peroxiredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00223089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAGT ATGTTTCATT TCTAGCCGCT GGCTGTATTT TTAGTTTAAT GGTCCTCAGC
CCTAGTGCTA TCGCCAACGA GAAAACCCAA GTGATGATGG GCGACAAGAC TGTCACTCTC
GCCGGGAAAT TACCCAAGCT TGAGCAAATG GCGCCACGCT TTAAAGTTGT CGACGAACAA
TTTACCCCTA TTAGTTTAAG TGACTTTAAA GGGAAAACCG TGCTGATCAG TGCCGTGCCC
AGTTTAGATA CCGGCGTCTG TGCGCTGCAA ACAAAGCGCT TTAATAGCGA AGTCAGTCAT
TTTTCCGATG ATGTCGTCAT GCTGACCATC AGTACAGATT TGCCCTTTGC GCAAAAACGT
TTCTGTAAGG TCGAGAATGT CGACAAAATC AAAGTCCTCT CCGACTCAGT GTGGCGTGAT
TTTGGCGAGA AATATGGCTT ATTGATTGAA GATTACGGCT TGCTCGCTCG GGCCATCTTT
ATTATCGATG CCGAAGGTCA GCTTAAATAC CAAGAACTGG TGCCCAATAT TACCGAACAC
CCCAATTACG ACGCCGCGCT TGAAGCGTTA AAAAGCATTC AAGCACAGCA ATAA
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| Protein sequence | MQKYVSFLAA GCIFSLMVLS PSAIANEKTQ VMMGDKTVTL AGKLPKLEQM APRFKVVDEQ
FTPISLSDFK GKTVLISAVP SLDTGVCALQ TKRFNSEVSH FSDDVVMLTI STDLPFAQKR
FCKVENVDKI KVLSDSVWRD FGEKYGLLIE DYGLLARAIF IIDAEGQLKY QELVPNITEH
PNYDAALEAL KSIQAQQ
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