| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1185 |
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| Symbol | |
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| ID | 4251469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1388056 |
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| End bp | 1388997 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117770 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_733322 |
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| Protein GI | 113969529 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0305189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAC TGTTAGAACC TATTGCGATT TTTACTCATG TGGCCAGAGC TGGTAGTTTT
AGTGCCGCCG CAAGAAGGCT TGGGATCTCT AAATCTAAGG TCAGTACGCA GGTAGCCGAT
CTCGAACATA GACTCGGTGT TCAACTGATC CAGCGTACCA CTCGAAGCTT AAGTCTGACT
GAAGCTGGAC ATTTGTTATA TCTGCAAGGT GAAGAGTTGC TTCGCGATGC CGAACAGGCC
ATTGCTAGCG TGCATAACTT AAACGATGCC ACCCGCGGCG TGTTAAAGGT GGGTATTTCC
CAGTCCTTTG GTGCTATGCA TATCATTCCC GCGCTGCCAT CATTTATGGA AAAACATCCT
GAGCTCGAGC TGCAAGTCAG CTTATTAGAT CATAAGGTGG ATGTAGTCAG CGAAGGTTTA
GACCTATTGT TAACTATGTC TGAGCAGCTT CCCTTGGGTA TGGTGGCGCG TCCTTTGATG
AAGTGTCAGT TCCTACTCGT TGCCTCACCT GATTATATTG CTAAACATGG CGAACCGTCG
CGTCCAGAGC AGTTGGTCGA CCATAACTGC TTGGTGTATC AAGGTGAGTG GCATGAGCAC
AGCATGTGGC AGTTTAAAAA GGGCGATGAT TACTGTGAGA TAGGTGTCTC TGGTAACTTC
AGAGTGGATA ACGCTCCCGC TTTAAAATCA GCTGCGATCA GTGGCTTAGG GGTTGTCTAT
CTTGCTAGTT ATTTGATGGA AGATGAAATC GCTAAGGGCA CATTAGTGCC GCTGCTGAGG
GACTGGCAAC TGACTCATCA TTTACCGCTA CAGGCCGTTT ATCCACGCCG TAAACACTTA
GCTCCTAAGG TGAGTGCCTT CATTGAGTTT ATTAAAGACC ATATTGGTAA TCCGCCTTAT
TGGGATATTC CCTATGCGGA ACTCTTCAGT GAACGTCAGT AA
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| Protein sequence | MLELLEPIAI FTHVARAGSF SAAARRLGIS KSKVSTQVAD LEHRLGVQLI QRTTRSLSLT
EAGHLLYLQG EELLRDAEQA IASVHNLNDA TRGVLKVGIS QSFGAMHIIP ALPSFMEKHP
ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLVASP DYIAKHGEPS
RPEQLVDHNC LVYQGEWHEH SMWQFKKGDD YCEIGVSGNF RVDNAPALKS AAISGLGVVY
LASYLMEDEI AKGTLVPLLR DWQLTHHLPL QAVYPRRKHL APKVSAFIEF IKDHIGNPPY
WDIPYAELFS ERQ
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