Gene Shewmr4_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1181 
SymboltrmB 
ID4251465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1384634 
End bp1385350 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content51% 
IMG OID638117766 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_733318 
Protein GI113969525 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.07367e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG TCACTACCGC TGAATTTAAT GAAGAAGGCA AGTATCTGCG TAAGATCAGA 
AGCTTTGTCC TAAGAGAAGG TCGTTTGACT AAAGGTCAAG CGCAAGCCAT TGAGACTCAG
TGGCCAACAA TGGGCTTAGA TTACAGCCCA ACACCATTAA ACCTGACCGA AGTATTTGGT
CGCGAAGCCG ATACCGTACT GGAAATCGGT TTCGGCATGG GCGCCTCTTT AGTACAAATG
GCACAAGAAG CTCCAGAACA GAACTTTATC GGTATTGAAG TCCATAAGCC TGGCGTGGGT
TCATGCTTAA GTGACGCTGC CGCTGCTGGG GTGACTAATC TTCGCGTGTA TCACCATGAT
GCAATGGAAG TGTTAGAACA TGCTATCGCC GATGGCAGCC TTGCGCGCGT GCAATTGTTC
TTCCCTGATC CGTGGCATAA AAAGCGCCAC CACAAGCGCC GTATCGTGCA GGCGGAGTTT
GCTGAGCTTA TTCGCCGTAA ACTGAAGATT GGCGGCGTGT TCCATATGGC GACCGACTGG
GAAAACTACA GCGAACATAT GCTGGAAGTG ATGAATGCGG CCAATGGTTA CAAAAACCAA
TCCGCCGATG GTACCGTGGT GCCGCGTCCA GATCATCGTC CACTGACTAA ATTTGAAGCC
CGCGGTCATC GCCTCGGCCA TGGCGTGTGG GATCTGATGT TTGAGCGTAT CGCTTAA
 
Protein sequence
MSEVTTAEFN EEGKYLRKIR SFVLREGRLT KGQAQAIETQ WPTMGLDYSP TPLNLTEVFG 
READTVLEIG FGMGASLVQM AQEAPEQNFI GIEVHKPGVG SCLSDAAAAG VTNLRVYHHD
AMEVLEHAIA DGSLARVQLF FPDPWHKKRH HKRRIVQAEF AELIRRKLKI GGVFHMATDW
ENYSEHMLEV MNAANGYKNQ SADGTVVPRP DHRPLTKFEA RGHRLGHGVW DLMFERIA