| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1177 |
|---|
| Symbol | |
|---|
| ID | 4251461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1381833 |
|---|
| End bp | 1382384 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638117762 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_733314 |
|---|
| Protein GI | 113969521 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000321845 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGAA ATACTAAGTT GAATTATGGA CTTATTGCTA TTGCCAGCCA TTGGCTGAGT
GCGGTTGTGG TGATAGGACT CTTTGCCGTC GGTGTGTGGA TGGTGGAATT GACCTACTAC
AGTGCCTGGT ACAAAACGGC ACCACATTGG CATAAAAGCA TTGGAATTTT GCTGCTGGCG
GTAACCCTGT TTCGTTTAGT TTGGCGTTTG GTTAATCCAA AGCCCGCTCC TGAGCAAAAT
CACCAGACAT GGGAAAAGGT GAGCGCCCAC ATTGCCCATG GCGCGATTTA CCTCTTATTA
CTGGTGATTA TGGCCGCTGG TATTTTGATT TCGACGGCAG AGGGCCGTGG AATTATGGTG
TTTGACTGGT TTGAGTTACC CGGCCTAACG CCGCTGATTG AAAATCAGGC TGATATCGCG
GGGGATATTC ATCAATATGC CGCCTATAGC TTGATTGCTC TGGTTTTACT GCATGCGTTA
GGCGCGTTAA AGCACCATTT TATCGATAAA GATTCAACAC TACTCAAGAT GATTAAATTT
AACCGAGGAT AA
|
|---|
| Protein sequence | MFRNTKLNYG LIAIASHWLS AVVVIGLFAV GVWMVELTYY SAWYKTAPHW HKSIGILLLA
VTLFRLVWRL VNPKPAPEQN HQTWEKVSAH IAHGAIYLLL LVIMAAGILI STAEGRGIMV
FDWFELPGLT PLIENQADIA GDIHQYAAYS LIALVLLHAL GALKHHFIDK DSTLLKMIKF
NRG
|
|---|
| |