Gene Shewmr4_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1169 
Symbol 
ID4251453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1375664 
End bp1376455 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content48% 
IMG OID638117750 
Producthypothetical protein 
Protein accessionYP_733306 
Protein GI113969513 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC TCAATAGCGG TATTTACTAT GGCAGCGTGA CCCATAGTCG CTATACGCCA 
GTAAAACATC ACTTTAGCTA CCAAATGGCT TTGCTGGCGA TTGATTTAGA CGAGGTCGAT
AGTATCAGTG CCATGGGGCG CAGTTTCGCC AGTCAGCGGC GCGCTCTGCT CAGATTTAAT
CCCAAGGATT ACCTTCGTAC TTTTACGACA AGGGATAACC AGAGTCGGCA GCTTGAGATA
AACGAGCCAA GCAGCTTTGC CCTTAAGCAG CGGGTGCTTG AGCAAGTTGC TGAGTTGGGC
GGTCACCAGC CTTGCGACAG AGTGTTGTTT GTTGGGCAAA TCCGTCACTT TGGCGTGTAC
TTCAGCCCAG TGAATTTTTA CTTTTGTTAT CAAGCACAAC AGCCTCTATA TATGCTCGCT
GAAGTAAGTA ACACCCCGTG GGACCAACGC CACTGTTATT TAGTGGATTT ATCCACCCCT
AAAACCACGG ATAAAGTGTT TCACGTTTCG CCTTTTATGA ACCTCGATAT GCGCTACCAG
TGGCATGTTG AACCGCCCGC TGAACGTTTA AACATTGGCA TCGAGAATCT ACCTAATCAG
TCGGGTAAGC GTTTGTTCAA TGCCAGCCTG TCGATGACTC GCCAAGCTAT CAATGCTCAA
TCCCTTCGCG CCTTGTTGTT TCGCTTTCCA TTTATGACGC TGAAAATTTT CGGCGGAATT
TATTGGCAGG CGTTAAAGCT GTTCTTTAAG CGCGTACCTT TTGTGCCACA TCCTGCCCAA
GTGGAGAAAT AA
 
Protein sequence
MSELNSGIYY GSVTHSRYTP VKHHFSYQMA LLAIDLDEVD SISAMGRSFA SQRRALLRFN 
PKDYLRTFTT RDNQSRQLEI NEPSSFALKQ RVLEQVAELG GHQPCDRVLF VGQIRHFGVY
FSPVNFYFCY QAQQPLYMLA EVSNTPWDQR HCYLVDLSTP KTTDKVFHVS PFMNLDMRYQ
WHVEPPAERL NIGIENLPNQ SGKRLFNASL SMTRQAINAQ SLRALLFRFP FMTLKIFGGI
YWQALKLFFK RVPFVPHPAQ VEK