Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1169 |
Symbol | |
ID | 4251453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1375664 |
End bp | 1376455 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638117750 |
Product | hypothetical protein |
Protein accession | YP_733306 |
Protein GI | 113969513 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGC TCAATAGCGG TATTTACTAT GGCAGCGTGA CCCATAGTCG CTATACGCCA GTAAAACATC ACTTTAGCTA CCAAATGGCT TTGCTGGCGA TTGATTTAGA CGAGGTCGAT AGTATCAGTG CCATGGGGCG CAGTTTCGCC AGTCAGCGGC GCGCTCTGCT CAGATTTAAT CCCAAGGATT ACCTTCGTAC TTTTACGACA AGGGATAACC AGAGTCGGCA GCTTGAGATA AACGAGCCAA GCAGCTTTGC CCTTAAGCAG CGGGTGCTTG AGCAAGTTGC TGAGTTGGGC GGTCACCAGC CTTGCGACAG AGTGTTGTTT GTTGGGCAAA TCCGTCACTT TGGCGTGTAC TTCAGCCCAG TGAATTTTTA CTTTTGTTAT CAAGCACAAC AGCCTCTATA TATGCTCGCT GAAGTAAGTA ACACCCCGTG GGACCAACGC CACTGTTATT TAGTGGATTT ATCCACCCCT AAAACCACGG ATAAAGTGTT TCACGTTTCG CCTTTTATGA ACCTCGATAT GCGCTACCAG TGGCATGTTG AACCGCCCGC TGAACGTTTA AACATTGGCA TCGAGAATCT ACCTAATCAG TCGGGTAAGC GTTTGTTCAA TGCCAGCCTG TCGATGACTC GCCAAGCTAT CAATGCTCAA TCCCTTCGCG CCTTGTTGTT TCGCTTTCCA TTTATGACGC TGAAAATTTT CGGCGGAATT TATTGGCAGG CGTTAAAGCT GTTCTTTAAG CGCGTACCTT TTGTGCCACA TCCTGCCCAA GTGGAGAAAT AA
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Protein sequence | MSELNSGIYY GSVTHSRYTP VKHHFSYQMA LLAIDLDEVD SISAMGRSFA SQRRALLRFN PKDYLRTFTT RDNQSRQLEI NEPSSFALKQ RVLEQVAELG GHQPCDRVLF VGQIRHFGVY FSPVNFYFCY QAQQPLYMLA EVSNTPWDQR HCYLVDLSTP KTTDKVFHVS PFMNLDMRYQ WHVEPPAERL NIGIENLPNQ SGKRLFNASL SMTRQAINAQ SLRALLFRFP FMTLKIFGGI YWQALKLFFK RVPFVPHPAQ VEK
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