| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1159 |
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| Symbol | |
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| ID | 4251443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1361735 |
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| End bp | 1364152 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117740 |
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| Product | ATP-dependent protease, putative |
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| Protein accession | YP_733296 |
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| Protein GI | 113969503 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACCG TGCCCACAGC AACACCCGCC ATCCCGTTAA CGAGTCAACA GCTTTATCGT
AAATCCGAAC TTAAACAGCT TAACCCTGAG TGTCAGTCTA CCGCTCAGCT CACGCCACTC
GATGATATTG TTGGGCAGGA GCGTGCCCAA CAGGCGGTGG AATTCGCCAT GGGGATCAAG
GAAAAGGGCT ATAACATTTA TGCTATTGGC CAAAACGGCT TAGGTAAACG CACAATGATG
CTGCGTTACC TGAATCGCCA TGATCCTATT GAACCGTCAC TGTTTGACTG GTGCTATGTG
GTTAACTTTG ACGATACTCG CAGCCCTAAA GTGCTTAAGC TGACCGCAGG AACGGGGCAA
GAGTTTAAAA AGTCCATCGA AAAACTCATG CTAAAACTGG TCAAAGCGCT GCCCTTAGCC
TTCGATAACG AAATGTATTA TGCCCGAGCT GAAAAGCTCA AAAGCCAACT AGCACAAAAA
CAAGAAGCCG CGCTGACAGA GCTGAGTGAA GAAGCCAAAC AGAAAAACAT TAGCCTCAGT
TTAACCCTGC AGGGCGATTA TCAAATGGTT GCCCTCAATG GCGAAGAGCC CCATGACGAG
GTCTCCTTTG GCGCCTTAAC CGAAGCCGAG CGCGCCCAGT TTGAAAGCAA TATCAATGGG
CTCGAAGTTA AACTTCGCGG CATCATTCGA CAAAATACCG AATGGGAAGA AGAGTTTAGC
GATACCCAAC AGGAACACGA CGAACAAGTC GCTAAAGATG TGCTGGTGCA CTTTTTCAAA
CCCTTGAAAG ACAAATACAA ACATCAGCCC GAAGTCAGAG CCTTCTTAAC GGGGATGCAG
TCGGATATCT TAAGTAATTT AGATATTTTC CTTGAGGAGA GTGAAGAGCA ACTCGCCCTC
GCCTACGCCT CCCTTGAAAA GAAAATGCCA CGCCGCTATC AGGTCAACGT CATCGTATGC
CAAGGGGAGC AAAAATTCCC GATTGTGGTT GAAGAAAGCC CAAGCTACCA CAGCCTGTTT
GGCTATGTTG AGAACGCCAC CTTTAGGGGC ACAGTGTTTA CCGACTTTTC ACTCATCCGC
CCAGGAAGCT TACACAAGGC CAACGGTGGC GTGCTGTTGA TGGATGCCAT CAAAGTACTG
GAGCGCCCCT ATGTATGGGA CGGCTTGAAA CGTGCACTGC GCTCCCGCAA GTTAGATTTA
AGCTCCTTGG AGCGGGAAGT CTCACTCTCG GGCACTATCT CATTGGCGCC GGAACCCATT
CCCTTAGATG TGAAGATCAT TCTGTTTGGG GATCATGAAA CCTATCAGCT TTTACAGCAT
TATGATCCTG ATTTTAGTGA GTTATTTAGG GTCACGGCCG ATTTTGAAGA TGTGATGGAC
AGAACCGATA TTTCGGAGGC GCAATATGCA CGATTTATTT CCAGCATAGT CCACGATAAC
AATATGTTGC ACTGTGACCG CAGTGCCATC GCACGGATCA TCGAATACAG TTCCCGTGAG
GCGCAGGACC AACAAAAGCT GTCGCTGCAT TCGGCAAACA TCGCCAATCT GCTTAGGGAA
TCAAACTTCT GCGCTAAGGC CGCCGCAAGT CAATGTATTG AAAAACAGCA CGTTGAGCAG
GCACTGAAAA ACCAAGAGCA ACGGGTCTCA CGCCTGCACG ACAATATTAT GGAGAGCTTT
ATCAACGGCA CAACATTAAT CAATACCCAC GATAAAGTTG TCGGCCAAAT CAATGCGTTA
TCAGTGATAT CTACCTCAGA TCATCAATTT GGTCTGCCGA ATCGTATTAC CGCCACCACC
GCCTTTGGTA AGGGGGAAGT GCTGGATATT GAGCATAGGG TTAAGCTCGG TGGCCGCATT
CACTCTAAAG GGGTGTTAAT CCTGACGGCT TATTTGGCTT CGGTCCTTGG AAAAACCGCG
CAAATCCCCC TCACCACCTA TCTCACCTTC GAGCAATCCT ACAGCGGTGT CGATGGTGAT
AGCGCCTCGA TGGCCGAATG CTGCGCCATC ATCTCCGCCA TCAGTGAGTT GCCCTTGAGG
CAGGATATTG CCATTACCGG ATCGATGAAT CAGTTTGGTG AGGCGCAACC CATCGGCGGC
GTAAATGAAA AAATCGAAGG CTTTTTCGAT GTGTGTAAGA TTAAGGGCCG CTCATCGAGC
CAAGGGGTAA TTATTCCCGA GTCGAATATC GCCAATCTCA TGTTACGCCA AGACATTGTA
GAAGCGGTTG CGCGTGGAGA ATTCCATATT TGGGCGATTA GCCATGTCAC CCAAGCGATG
GCACTACTCC TGGGCAAAGC GGCGGCGACC TTAGGAGGCG ATGATGGGAA ACACACAGGC
CATTATGCCC CAGAGTGCGT ATTTGGGATT GCCCAGCAAA AACTCAATGC CCTGAGGGCG
CTCCCTAAAG CCAATTGA
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| Protein sequence | MPTVPTATPA IPLTSQQLYR KSELKQLNPE CQSTAQLTPL DDIVGQERAQ QAVEFAMGIK
EKGYNIYAIG QNGLGKRTMM LRYLNRHDPI EPSLFDWCYV VNFDDTRSPK VLKLTAGTGQ
EFKKSIEKLM LKLVKALPLA FDNEMYYARA EKLKSQLAQK QEAALTELSE EAKQKNISLS
LTLQGDYQMV ALNGEEPHDE VSFGALTEAE RAQFESNING LEVKLRGIIR QNTEWEEEFS
DTQQEHDEQV AKDVLVHFFK PLKDKYKHQP EVRAFLTGMQ SDILSNLDIF LEESEEQLAL
AYASLEKKMP RRYQVNVIVC QGEQKFPIVV EESPSYHSLF GYVENATFRG TVFTDFSLIR
PGSLHKANGG VLLMDAIKVL ERPYVWDGLK RALRSRKLDL SSLEREVSLS GTISLAPEPI
PLDVKIILFG DHETYQLLQH YDPDFSELFR VTADFEDVMD RTDISEAQYA RFISSIVHDN
NMLHCDRSAI ARIIEYSSRE AQDQQKLSLH SANIANLLRE SNFCAKAAAS QCIEKQHVEQ
ALKNQEQRVS RLHDNIMESF INGTTLINTH DKVVGQINAL SVISTSDHQF GLPNRITATT
AFGKGEVLDI EHRVKLGGRI HSKGVLILTA YLASVLGKTA QIPLTTYLTF EQSYSGVDGD
SASMAECCAI ISAISELPLR QDIAITGSMN QFGEAQPIGG VNEKIEGFFD VCKIKGRSSS
QGVIIPESNI ANLMLRQDIV EAVARGEFHI WAISHVTQAM ALLLGKAAAT LGGDDGKHTG
HYAPECVFGI AQQKLNALRA LPKAN
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