| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1151 |
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| Symbol | |
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| ID | 4251819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1353744 |
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| End bp | 1354421 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117732 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_733288 |
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| Protein GI | 113969495 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCTC AGCATAAAGT CACAACCTAT GGTCAGCCCA CCGCTCGCAC AATCAGAGTA
GGATTAGTGG AAGATCAACA GCTTGTACGT CAGGGTATCG CCAGCTTGAT AGCCATCTCA
CAGCATATCG AGGTGAGCTG GCAGGCCGAG AATGGTCAAG AGGCGCTAAA ACGGCTGCAA
ACGGATGCCG TAGATGTGCT TTTAAGCGAT ATACGTATGC CAGTGCTCGA TGGTCTCAGT
CTGCTAAAAC AGCTTCGCGC CGCACAAAAT TCCATACCAG TCATTATGTT AACCACCTTT
GATGACAGCG AATTGTTTTT AAATAGCCTG CAGGCGGGCG CGAATGGCTT CTTATTGAAA
GATGTCTCTC TGGATAAATT ACTTGAGGCC ATCGAAATCG TGGCCCAGGG CGGACACTTG
ATTGAACCTT CAGTACTTGA ACAGATGCAG CAATCCTCTG CAACAGCGCA AAGCGGCCCG
ACTCACTACT TATTATCCGA ACGCGAGCGG GAGATCTTAG GTTTTATGGC GGGGGGATTT
TCCAATAAAG AAATTGCCAA TGCAGTGTTT TTGGCCGAAG GCACGGTCAA AAACCATGTA
TCCACCATAC TGGCTAAACT CGATTGCCGT GACCGCACCC AAGCCGTGCT TAAGGGGTTG
CAGCTCTCTT TGATTTAA
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| Protein sequence | MESQHKVTTY GQPTARTIRV GLVEDQQLVR QGIASLIAIS QHIEVSWQAE NGQEALKRLQ
TDAVDVLLSD IRMPVLDGLS LLKQLRAAQN SIPVIMLTTF DDSELFLNSL QAGANGFLLK
DVSLDKLLEA IEIVAQGGHL IEPSVLEQMQ QSSATAQSGP THYLLSERER EILGFMAGGF
SNKEIANAVF LAEGTVKNHV STILAKLDCR DRTQAVLKGL QLSLI
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