| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1149 |
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| Symbol | |
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| ID | 4251817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1351448 |
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| End bp | 1353016 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117730 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_733286 |
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| Protein GI | 113969493 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.737349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACAC ATTCAAAAAA TGGTGAAAAA CACCTATCCG AAAACGCTAT TCTCCTCTCG
ACAACCGATC TGAAAGGCAA CATTAAGTAT GTCAATCAAA CCTTTTCGCA GATCAGTGAA
TATAGCGTTG CCGAGTTGCA GGGGAGCCCG CATAACATAG TGCGCCATGG TGATATGCCA
TCAGCCGCCT TTAAAATGCT TTGGGAACGG ATAAGAAGCG GCAAACCTTG GATGGGGATT
GTCAAAAATA GAACAAAAAC CGGTGGCTAT TACTGGGTGA ATGCCTACGT CGCCCCTGTG
TACGAAAATG GCAAAATTCA TGAGTATCAA TCCGTTCGCC GCCAAGCAAC CCCAGAACAA
ATCAAGGCGG CCGAGGAAAT CTATCAAGGG ATCAATCAAG GACAACAGCC CAAGGCGCTG
AAAAAAGACC GCTTAGGATT TCGCGGAAAA ATACTCGTGA CGATGTTGTT TACCATCGCA
CTAACTGCCT ACTTGGCAAC GTATTCGCCC ATCTTAGCTG CCCTTGCTGG TGGACTACTT
GCTTTGGGTC TGTGGTATAT GCTCATGCAG CCTTTTCAGG CATTAGTACA GGTGGCCAGC
AATATTATCG ATGATCCCGT TGCTATGGGG GTTTACACCG GCAGGCAAGA TGAAATCGGT
AAGCTAGATC TGGCGCTGCG ATTTTTGATC ACCGAAATTG GCGGCGTAGT GGGCCGAATG
GCGGATTCTG CCAGTGAGAT CCAAGAGCAG AGCGTGAATC TGAAACAAAC TATCACCAAT
ACTTGGGAAC ATGCCGATAG CCAGAGCGCG CAAACCACAC AGGCTGCAAC GGCGATGGAG
CAAATGAGTG CCAGCTTTGC GGAGGTAACG GATAATATCC ATCGCACCGC ATCCGAGATG
GTTTCTAGCC ATGAGGCGGC GCAGCGTGGT CATTCACGGC TTGAAACCGT TATCGAGGCG
ATACATCAGC TGAGTGTACA GGTGAGCCAT TTCTCCGATG TGGTGCAAAC GATTGAGCAG
GACAGCCAAG CGATTCATCA AGTGCTAGAA GTGATCCGCG CGATTGCCGA TCAAACCAAT
CTGTTAGCGC TGAATGCCGC GATTGAAGCG GCGCGGGCGG GGGAAAGCGG TCGCGGTTTT
GCGGTCGTTG CCGATGAAGT CCGGCAGTTA TCTAGCCGAA CCAGCCAGTC GACCTCGCAA
ATTGAACAGA TTGTAAGCCG CTTTAAAGAC AGTACGCAAA GGGCGGTATC AACTATGACG
GCGGGTCAAG AGCAGGTTAA GCGCTCAGTT TCATTAGCGC AGGATGCCAG CATTGCCTTT
GGTGAGTTGT TATCTTCTAT CGCTAGAATT AACTCTTTGA GTGATGATAA TGCGGCCGCA
ATGACTCAGC AGACCTCCGT GGCGGCAGAA ATCAGCCGTG CTATCCATGT GATCAGCGAT
TTGGCGCAGC AGAGTTTGCA GCAGACCCAG GATGCGGCGG CCAGGGGAGA TCAGGTTTCG
CGATTATCGA CTAAAACCCA CCACCTATCG CAGCAATTCT GGCAACAGAG CGTACAACGT
AAGTATTAA
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| Protein sequence | MQTHSKNGEK HLSENAILLS TTDLKGNIKY VNQTFSQISE YSVAELQGSP HNIVRHGDMP
SAAFKMLWER IRSGKPWMGI VKNRTKTGGY YWVNAYVAPV YENGKIHEYQ SVRRQATPEQ
IKAAEEIYQG INQGQQPKAL KKDRLGFRGK ILVTMLFTIA LTAYLATYSP ILAALAGGLL
ALGLWYMLMQ PFQALVQVAS NIIDDPVAMG VYTGRQDEIG KLDLALRFLI TEIGGVVGRM
ADSASEIQEQ SVNLKQTITN TWEHADSQSA QTTQAATAME QMSASFAEVT DNIHRTASEM
VSSHEAAQRG HSRLETVIEA IHQLSVQVSH FSDVVQTIEQ DSQAIHQVLE VIRAIADQTN
LLALNAAIEA ARAGESGRGF AVVADEVRQL SSRTSQSTSQ IEQIVSRFKD STQRAVSTMT
AGQEQVKRSV SLAQDASIAF GELLSSIARI NSLSDDNAAA MTQQTSVAAE ISRAIHVISD
LAQQSLQQTQ DAAARGDQVS RLSTKTHHLS QQFWQQSVQR KY
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