| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1138 |
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| Symbol | thrA |
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| ID | 4251806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1337582 |
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| End bp | 1340050 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117719 |
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| Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
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| Protein accession | YP_733275 |
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| Protein GI | 113969482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.592327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTA TGAAATTTGG TGGTACCTCG CTTGCAAATT GGCAGCGATT TTCAATGGCG
GCGGATATCG TGGCCAAGGC GGCAAAAGCA GAGCCGGTGG CTACAGTGCT TTCTGCGCCC
GCGACAGTGA CAAACGCCTT GCTAGAAATG GTCGATGTGG CGGTGAAAGG GGAAGATTAT
TCGCCAGTCA TTCAACACGT TGAGCGGGTG TTTACCTCGA TCTATCAGGA TGCGGTCAGT
TCTGGACTCT CGAGCAGTCA AAGCGAAGTG TTGTTCGCCG GACTGAGTGC GCAGCTTGCG
CGTTGGCAGG ACAGATTACG CGGTATTACG CTGCTGCAGG AATGCCCTGA CGGAGTACGC
GCCGAGATCG TTGTTGCTGG CGAGCGTTTG TCTGCTGCTT TGATGGAGCA AGTCATGCTG
GCAAAAGGCA TCACTTCGGC GCAGCTAGAT CCGCGTGAGC TGTTTTTAGG CCGTGGTCGT
CCACTCGAAT CCGTGGTGGA TATTGCCGTC AGTAAACCGC GATTCAAAAA TCTTGCCCTC
GATGAAAAAC GGGTTTGGGT GATGCCCGGC TTTACTGCCG CCGATGAAGA CGGCAAGGTT
GTGACCTTAG GCCGTAACGG TTCTGACTAT TCCGCTGCCG TGCTGGCCGC TTGTTTAGAT
GCTTCAAGTT GTGAGATCTG GACCGACGTT GACGGCGTAT ACAACACCGA TCCTCGGGTT
GTCACCGATG CTAAGTTGCT GTCACAGCTC AGTTATCAAG AGGCGATGGA GCTGTCTTAT
TTTGGGGCTA AGGTACTGCA TCCTAAAACC ATTGCGCCTA TCGCTCAGTT TCATATTCCC
TGTTATATCA AGAACAGCTT TAATCCCGAT GCGCCCGGCA CTCTAGTATC GAATCAGGCC
GATGAAAGCG GTCTGCAGGT GAAGGCCATT TCTAATCTGG ATAATCAAAC CATGTTTGAT
GTATCAGGCC CCGGCATGAA GGGCATGGTC GGCATGGCGA GCCGCACACT GGCGGCAATT
TCCCGTAGTG GCGTTTCCGT GTCACTCATC ACCCAGAGTT CTTGCGAATA CAGCATCAGC
TTTTGTGTGG CTACAAGCGA GTCCGCCAAA GTGAAGTCGG CACTGGAGCA AGAGTTTGAG
CTAGAAATCA AAAGTGACTT ACTCGAGCCG ATTGAAATGC GCCATGACTT AGCAATCGTC
TCCTTGATCG GTGATGGAAT GCGTACCCAT AAAGGTGTGG CGGCGCGGTT CTTCCAAGCG
TTAGCGCAGG CGAGTGTGAA TATTATCGCG ATTGCGCAAG GCTCCTCCGA GCGTTCTATT
TCAACTGTAA TCGAGCAGCG AAAGACCAAA CATGCGGTTG CCGCCTGTCA TCAGGGCTTT
TTCGATGTGC AGCAATATTT GGATGTGTTT TTAGTGGGTT GCGGCAATGT TGGCGCAGGC
TTACTCGAGC AAATCAAACA TCAGGCGAGT GTGTTAAAAG AGCAGCACAT TAGTATTCGT
GTCTGCGGCA TCGTGAATTC AAGCAAGATG TTACTCGATA GTGCCGGTAT TGATTTAAAT
AATTGGCAAA ACCTGCTTGC CGACAGTCAG CAGCCAAGCG ATCTGCCCGC GCTATTGGCT
TGGGTGAAAG AGCAACAATT ATTAAACCCT GTACTGGTGG ATTGTACTTC AAGCGATCAA
GTGTCGAACC AGTATTTAGA GGTAATGAAT GCGGGCATGC ACGTGGTGAC GCCCAATAAG
AAGGCCAATA CTCGAGACTA CGCTTACTAC CAAGCACTGC GTCAAACAGC CTTGAAACAA
CGTCGTCAGT TCTTGTATGA GACTAACGTT GGCGCAGGAT TGCCCGTTAT CGATAACTTG
AAAAAACTGT TATTTGCTGG CGATAAGTTG CACAAGTTTA ACGGTATTTT GTCAGGCTCC
TTATCCTTTA TCTTCGGTAA ACTCGATGAG GGTATGACGC TGTCAGAAGC GACTAAACTG
GCGCGGGAAA AATGCTTTAC CGAGCCCGAT CCCCGTGATG ATTTAAGTGG TATGGATGTG
GCGCGTAAAG TGCTGATCTT GGCCCGTGAA GTGGGTTTGA AACTTGAGCT AAGCGATATC
GTTGTCGACT CAGTCTTACC TGACGATTTT GATGATTCAG GCGATGTGGA AAGTTTTATG
GCGCGTTTAC CCGAGGCCGA TGCCGCGATT GCGGCGCGAG TGGCAGAGGC GAAAGCGCAG
GGTAAAGTGC TGCGTTATGT GGGGCAGATT GAAGAAGGCG CGTGTTATGT GCGTATCACC
GAAGTCGATG CTACCGATCC GCTCTACAGC GTAAAAGGCG GTGAAAACGC GCTAGCATTC
TACAGCCGTT ATTATCAGCC GATTCCTTTT GTATTACGTG GATACGGTGC GGGTACAGAA
GTGACAGCGG CCGGCGCCTT TGCCGATGTA TTAAGAACCT TAAATTGGAC TCGTGAGGTG
AGTGTATGA
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| Protein sequence | MKVMKFGGTS LANWQRFSMA ADIVAKAAKA EPVATVLSAP ATVTNALLEM VDVAVKGEDY
SPVIQHVERV FTSIYQDAVS SGLSSSQSEV LFAGLSAQLA RWQDRLRGIT LLQECPDGVR
AEIVVAGERL SAALMEQVML AKGITSAQLD PRELFLGRGR PLESVVDIAV SKPRFKNLAL
DEKRVWVMPG FTAADEDGKV VTLGRNGSDY SAAVLAACLD ASSCEIWTDV DGVYNTDPRV
VTDAKLLSQL SYQEAMELSY FGAKVLHPKT IAPIAQFHIP CYIKNSFNPD APGTLVSNQA
DESGLQVKAI SNLDNQTMFD VSGPGMKGMV GMASRTLAAI SRSGVSVSLI TQSSCEYSIS
FCVATSESAK VKSALEQEFE LEIKSDLLEP IEMRHDLAIV SLIGDGMRTH KGVAARFFQA
LAQASVNIIA IAQGSSERSI STVIEQRKTK HAVAACHQGF FDVQQYLDVF LVGCGNVGAG
LLEQIKHQAS VLKEQHISIR VCGIVNSSKM LLDSAGIDLN NWQNLLADSQ QPSDLPALLA
WVKEQQLLNP VLVDCTSSDQ VSNQYLEVMN AGMHVVTPNK KANTRDYAYY QALRQTALKQ
RRQFLYETNV GAGLPVIDNL KKLLFAGDKL HKFNGILSGS LSFIFGKLDE GMTLSEATKL
AREKCFTEPD PRDDLSGMDV ARKVLILARE VGLKLELSDI VVDSVLPDDF DDSGDVESFM
ARLPEADAAI AARVAEAKAQ GKVLRYVGQI EEGACYVRIT EVDATDPLYS VKGGENALAF
YSRYYQPIPF VLRGYGAGTE VTAAGAFADV LRTLNWTREV SV
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