| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1135 |
|---|
| Symbol | |
|---|
| ID | 4251803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 1335401 |
|---|
| End bp | 1335676 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638117716 |
|---|
| Product | Trp operon repressor |
|---|
| Protein accession | YP_733272 |
|---|
| Protein GI | 113969479 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2973] Trp operon repressor |
|---|
| TIGRFAM ID | [TIGR01321] trp operon repressor, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000274538 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCCA ATTGGGACTT AGTTTTAGAG AAAATTTTGA GCCATGGAAA CTATGAAGAA
CTCTCAGTGT TGTTCCATTT ATTGCTGACA GAAGAAGAGC GCAGTGCGAT CGCGGGACGA
TTAAAGGTAT TCCAATTATT ACTCGATGGT GAGATGAGCC AGCGGCAAAT CGCGGCGGAA
TACGAGGTCA GCATCGCCAC GATCACACGC TGTTCAAACT ATTTAAAGAA TATGGCACCC
AGCCATAGAG AAAAAATTCA ACAGCTCATC AAATAA
|
|---|
| Protein sequence | MRANWDLVLE KILSHGNYEE LSVLFHLLLT EEERSAIAGR LKVFQLLLDG EMSQRQIAAE
YEVSIATITR CSNYLKNMAP SHREKIQQLI K
|
|---|
| |