Gene Shewmr4_1134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1134 
Symbol 
ID4251802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1334762 
End bp1335211 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID638117715 
Productcytochrome c, class II 
Protein accessionYP_733271 
Protein GI113969478 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.45313e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TACTCCTGAC TCTCGTTGCC GGTACCTTAT TGGCTTCAAC TGCACAAGCA 
CACAATTTTG AAGATGCAAA GGACGCGATT GAATATCGCC AATCTGCATT TGGCCTGATT
GCTTATAACT TTGGCGATAT GGGCGCTATG ATGAAAGGCA AGAAACCTTT CGAAGCTGAA
ACCTTCGCAA TGCGCGCCAA CAATGTCGCT GCTCTTTCAC ACATTCCTTT CGAAGGCTTT
ATTGAAGATT CAGATAAAGG CGATACCGAA GCGCTAGCCA AAGTATGGCA AGACAAGGCT
GACTTCGACG CTAAGATGAA AACCTTCCAA GAAAATGCCG CTATTTTAGC GACTGTGGCT
CAAAAAGGTG ACCAAGCTGA AATCAAGCAA GCCTTTATGA ACACTGGCAA GAGCTGTAAA
GGTTGTCACG ACGTTTACAA AAAAGACTAA
 
Protein sequence
MKKLLLTLVA GTLLASTAQA HNFEDAKDAI EYRQSAFGLI AYNFGDMGAM MKGKKPFEAE 
TFAMRANNVA ALSHIPFEGF IEDSDKGDTE ALAKVWQDKA DFDAKMKTFQ ENAAILATVA
QKGDQAEIKQ AFMNTGKSCK GCHDVYKKD