Gene Shewmr4_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1133 
Symbol 
ID4251801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1334007 
End bp1334696 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID638117714 
Productcytochrome B561 
Protein accessionYP_733270 
Protein GI113969477 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.90304e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCG AACATATCAA AGTTAAAGTC TGGGATTTAC CCACACGCTT TTTTCACTGG 
GGCATGGTGG CCCTCATGGC CTTACTCTGG TGGAGCGCCG AAGTGGGTGA AATGCAATGG
CACCAGATCT TTGCTTATAG TTTGTTGATC TTGATTGGCT TTCGGCTTTT ATGGGGCTTG
ATTGGCAGTG ATACTGCGAG GTTTAGTCAC TTCGTGCATC ATCCCAAGGT GGTGTTTGAG
TATTTGAAAG ACGTTCGCGC AAAGGGCGTG TCAGTGGTTT TAGGGCATAA TCCGATGGGC
GGTTATATGG TGATTGTGTT GATTGCCATT ATCAGCTTAC AGCTAATCAC TGGACTCTTT
GCTACCGATG ATGTGTTTAC CGAAGGTCCA CTGTACAGCT ATGTGAGTGC TGATACAGCT
TCGTTTCTCA CTTGGTTGCA TAAGATGAAT TTCAACCTAA TCTTAGCCTT GAGTGCCGTG
CATGTGTTGG CTGTCGTTGT ACACGCGCTT AAAGGTGACA AGTTAGTGGG AGCCATGCTC
AGCGGTTACA AACGGGTGTC TAAAGTAGAG CACGCCAAAT CTGAGACTCA GTTGGTGTTT
AAATCACAGT GGTTGGCTTT AATTGTGCTG TTAATCATCG CTGGAGTGGT GTTTACCTAT
TTGATGTGGC CCATAGTACA AGTGCTCTAG
 
Protein sequence
METEHIKVKV WDLPTRFFHW GMVALMALLW WSAEVGEMQW HQIFAYSLLI LIGFRLLWGL 
IGSDTARFSH FVHHPKVVFE YLKDVRAKGV SVVLGHNPMG GYMVIVLIAI ISLQLITGLF
ATDDVFTEGP LYSYVSADTA SFLTWLHKMN FNLILALSAV HVLAVVVHAL KGDKLVGAML
SGYKRVSKVE HAKSETQLVF KSQWLALIVL LIIAGVVFTY LMWPIVQVL