Gene Shewmr4_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1131 
Symbol 
ID4251799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1331746 
End bp1332210 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID638117712 
ProductDNA polymerase III chi subunit, HolC 
Protein accessionYP_733268 
Protein GI113969475 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000927432 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CGCTGTTTTA TTTACTGCCG CCGGTGGGCG TGAACACGGC CCTTAATGAC 
ATGTATCAAT TGGCTTGCCG CCTAGCCCAA CAGGGATTTA TACACCAGCA GCAGGTCTAT
ATTCACTGTC AGGACAAGAA CATCGCCTTC GAAATCGACG AGTTACTATG GCAGTTTGAA
CCCAGTGCAT TTGTCCCCCA TAACCTCAAA GGTGAAGGCC CCACTACTGG CTCACCCGTT
GAAATCGGTT TTGACAGGCT CGGACCAAAC AAAAGTCGCC AACTTCTGAT TAATCTTGCA
GACCAAGTAC CTCCGTTTGC GGTAAACTTT GGTCAAATCT TCGATTTTGT GGCTAATGAC
GACCAACATA AGGCGATAGC ACGTGAACGC TACCGCCAAT ATCGTGGCTT AGGGATTGAA
TTAACAACCC AAAATTTAGC AACACATCCA CTTAATTTAG CTTGA
 
Protein sequence
MTQALFYLLP PVGVNTALND MYQLACRLAQ QGFIHQQQVY IHCQDKNIAF EIDELLWQFE 
PSAFVPHNLK GEGPTTGSPV EIGFDRLGPN KSRQLLINLA DQVPPFAVNF GQIFDFVAND
DQHKAIARER YRQYRGLGIE LTTQNLATHP LNLA