Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1131 |
Symbol | |
ID | 4251799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1331746 |
End bp | 1332210 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117712 |
Product | DNA polymerase III chi subunit, HolC |
Protein accession | YP_733268 |
Protein GI | 113969475 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000927432 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAG CGCTGTTTTA TTTACTGCCG CCGGTGGGCG TGAACACGGC CCTTAATGAC ATGTATCAAT TGGCTTGCCG CCTAGCCCAA CAGGGATTTA TACACCAGCA GCAGGTCTAT ATTCACTGTC AGGACAAGAA CATCGCCTTC GAAATCGACG AGTTACTATG GCAGTTTGAA CCCAGTGCAT TTGTCCCCCA TAACCTCAAA GGTGAAGGCC CCACTACTGG CTCACCCGTT GAAATCGGTT TTGACAGGCT CGGACCAAAC AAAAGTCGCC AACTTCTGAT TAATCTTGCA GACCAAGTAC CTCCGTTTGC GGTAAACTTT GGTCAAATCT TCGATTTTGT GGCTAATGAC GACCAACATA AGGCGATAGC ACGTGAACGC TACCGCCAAT ATCGTGGCTT AGGGATTGAA TTAACAACCC AAAATTTAGC AACACATCCA CTTAATTTAG CTTGA
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Protein sequence | MTQALFYLLP PVGVNTALND MYQLACRLAQ QGFIHQQQVY IHCQDKNIAF EIDELLWQFE PSAFVPHNLK GEGPTTGSPV EIGFDRLGPN KSRQLLINLA DQVPPFAVNF GQIFDFVAND DQHKAIARER YRQYRGLGIE LTTQNLATHP LNLA
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