| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1124 |
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| Symbol | |
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| ID | 4251792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1318235 |
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| End bp | 1320820 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117697 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_733261 |
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| Protein GI | 113969468 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCTA TAGATACCGA TGATTTAGAA AAACATACCC CTATGATGCG TCAATATTTG
ACCATGAAAG CAGAGCATCA CGACATGCTG CTGTTTTATC GTATGGGTGA CTTCTATGAA
CTCTTCTATG ATGACGCAAA ACGCGCCTCT GAATTATTGG GCATTTCCCT TACAGCTCGC
GGCAAAAGTG GTGGCGATCC GATCCCGATG GCGGGAATTC CTTACCATGC GGTTGAAGGC
TATCTGGCCA AATTGGTTCA AATTGGTCAA TCGGTCGCGA TCTGTGAGCA GATAGGCGAC
CCCGCCACCT CAAAAGGCCC AGTTGAGCGA AAAGTGGTGC GTATCGTCAC CCCTGGTACC
TTGACCGACG AAGCCCTATT GCAAGAGAGA CAGGACAATC TGTTAGCCGC GGTTTACCAA
GGCAAAGTTG GTTTTGGCTA CGCTACCCTC GATGTGTCTT CCGGCCGCTT CGTGATTGCT
GAATTAGAGA CAAAAGAGTC CCTCGAAGCC GAACTGCAAC GTACCAATCC GGTCGAAATT
CTCTATAGCG AAGATTTTGG CGCGATGGAG CTATTGCATC ATTTTAAAGG CAAGCGTCGC
CGCCCAGAGT GGGAGTTTGA TTACGATACC AGCATCAAAC TGCTGCTGGC ACAATTTGGC
ACTAAGGATT TGCACGGCTT TGGGATTACC GATGCCAGGC TTTCGCTACA AGCGGCTGGC
TGCTTAATGC AATATGTGAA AGACACCCAG CGCACCGCCC TGCCACATAT CAATGCCATT
ACCCGTTTCA ATCAAACCGA TACGATTGTC TTGGATGCGG CAACGCGCCG TAACCTCGAG
CTGACACAAA ATTTGAGTGG TGGTCGAGAT AACACCTTAG CAGCCGTACT CGACAATACC
GCCACAGCCA TGGGCAGCCG GATGTTGCAA CGCTGGATCC ATCAGCCGCT AAGGGACCAT
GCCCAGATTT TTGCTCGCCA AACGGCCGTG AATGAATTGC TCGAGACCAC TGCCCATGAG
TCATTGCATG AGCAGCTTAA AGCCCTAGGC GATATCGAAC GTATTATGGC AAGGCTGGCG
CTGCGTACCG CTCGTCCAAG GGATTTTGCC CGCCTACGCC AAGCATTAAA CCTATTACCT
AAGTTGCAGC AATCACTCGC GCAATTAAGT GCGCCCCATA CGGTGAAACT AGGCCAACTC
TTAGGTGAGT TTCCCGAAGA GCAACAACTG CTTGAGCGCG CCATTGTCGA TAACCCGCCG
ATGCTTATCC GTGACGGCGG CGTGATCCGT GAAGGCTACA ATGCCGAGTT AGATGAATGG
CGAGGTTTAA GTGAAGGAGC CACTGATTAT CTAGTTCAGC TCGAGGCACG GGAAAAAGAG
CGTACAGGCA TTGCCACGTT GAAGGTTGGC TACAACCGAG TGCATGGCTA CTACATCGAG
GTCAGTCGCC TGCAATCGCA GCAAGTGCCG TTAAATTACC AGCGCCGTCA AACCCTTAAG
AATATGGAGC GTTACATCAC GCCCGAGCTT AAGGAATACG AAGAAAAAGT GCTGTCGAGC
CAAGGTAAGG CGCTCGCCCT TGAAAAACAA CTATGGGACG AATTGTTTGA TTTAATCCTC
CCCAAGTTGC ATGAGCTACA AGCCTTCGCC AGAGCGGCAG CCGAGCTCGA TGTGCTGAGT
AACTTTGCCG AACGTGCCGA AACCTTAGGG TATACCTGCC CAGAACTGAG CAGCGAAATC
GGGGTAAAAA TCGAAGCGGG TCGCCACCCA GTGGTTGAAC GTGTGAGTCA AACGCCTTTT
ATCGCCAACC CTGTCACCCT GTACAATCAA CGCCGGATGT TGATTGTTAC AGGTCCAAAC
ATGGGCGGTA AATCGACCTA CATGCGCCAA GTGGCGCTTA TCACCCTAAT GGCACATATT
GGCTGCTTTG TGCCAGCAGA TCGCGCCATC ATTGGCCCTA TCGATCGGAT TTTTACTCGG
ATTGGCGCCT CAGACGATCT CGCCTCTGGT CGCTCAACCT TTATGGTGGA AATGACTGAA
ACGGCAAATA TTCTCCATAA TGCAACCGCG CAAAGTTTAG TCTTGATGGA TGAAATTGGC
CGTGGCACCT CGACCTACGA TGGCCTGTCA TTAGCCTGGT CTGCGGCTGA ATATTTAGCA
CAGCAAGTCG GCGCAATGAC GCTGTTTGCG ACCCATTATT TCGAGTTAAC ACAATTACCG
GAACTCATGG CTGGCGTCTA TAACGTGCAC CTCGATGCAA TTGAACACGA AGACACCATC
GCCTTTATGC ATGCAGTGCA AGAAGGTGCG GCCAGTAAGA GTTATGGTTT GCAGGTTGCG
GCCCTTGCCG GGGTGCCTGC TCGGGTGATT AAGGCGGCAA AACACAAGTT ACATCAACTT
GAGAGCCGCG ATCATCAAGT AGAAGGTGTT AATGTTAACG GCACTAGGGC ACCGATCCAA
ACCCTGCTCG CTCTGCCTGA GCCGGTGGAG AATCCCGCTG TCAGCAAATT AAAAGCCATC
AATCCCGATA ACCTGACCCC AAAACAGGCG CTGGATTTAC TCTACGAGCT AAAACGCTTG
AGTTAA
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| Protein sequence | MNPIDTDDLE KHTPMMRQYL TMKAEHHDML LFYRMGDFYE LFYDDAKRAS ELLGISLTAR
GKSGGDPIPM AGIPYHAVEG YLAKLVQIGQ SVAICEQIGD PATSKGPVER KVVRIVTPGT
LTDEALLQER QDNLLAAVYQ GKVGFGYATL DVSSGRFVIA ELETKESLEA ELQRTNPVEI
LYSEDFGAME LLHHFKGKRR RPEWEFDYDT SIKLLLAQFG TKDLHGFGIT DARLSLQAAG
CLMQYVKDTQ RTALPHINAI TRFNQTDTIV LDAATRRNLE LTQNLSGGRD NTLAAVLDNT
ATAMGSRMLQ RWIHQPLRDH AQIFARQTAV NELLETTAHE SLHEQLKALG DIERIMARLA
LRTARPRDFA RLRQALNLLP KLQQSLAQLS APHTVKLGQL LGEFPEEQQL LERAIVDNPP
MLIRDGGVIR EGYNAELDEW RGLSEGATDY LVQLEAREKE RTGIATLKVG YNRVHGYYIE
VSRLQSQQVP LNYQRRQTLK NMERYITPEL KEYEEKVLSS QGKALALEKQ LWDELFDLIL
PKLHELQAFA RAAAELDVLS NFAERAETLG YTCPELSSEI GVKIEAGRHP VVERVSQTPF
IANPVTLYNQ RRMLIVTGPN MGGKSTYMRQ VALITLMAHI GCFVPADRAI IGPIDRIFTR
IGASDDLASG RSTFMVEMTE TANILHNATA QSLVLMDEIG RGTSTYDGLS LAWSAAEYLA
QQVGAMTLFA THYFELTQLP ELMAGVYNVH LDAIEHEDTI AFMHAVQEGA ASKSYGLQVA
ALAGVPARVI KAAKHKLHQL ESRDHQVEGV NVNGTRAPIQ TLLALPEPVE NPAVSKLKAI
NPDNLTPKQA LDLLYELKRL S
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