| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1118 |
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| Symbol | ispF |
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| ID | 4251086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1313025 |
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| End bp | 1313504 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117691 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_733255 |
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| Protein GI | 113969462 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0949001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC GAATCGGCCA TGGTTTTGAT GTCCATAAAT TTGGTGAAGC GCGCCCGTTA
ATTTTATGTG GGGTCGAAGT CCCCTACGAA ACCGGGCTGG TGGCTCATTC CGATGGCGAT
GTGGTGCTGC ATGCCATTTC CGATGCCATT TTAGGGGCGA TGGCCCTAGG GGATATTGGT
AAACATTTCC CTGATACCGA TGCCGCTTAT AAGGGCGCCG ATAGTCGCGT TTTGCTGCGC
CACTGTTATG CGCTAGCGCG GGCGAAGGGA TTTGAGCTGG GTAATCTGGA TGTCACTATC
ATTGCCCAGG CGCCTAAGAT GGCGCCGCAT ATCGAGGATA TGCGCCAAGT GCTGGCGGCC
GATCTTAATG CTGACATTGC CGATATCAAC GTTAAGGCCA CCACTACCGA AAAACTCGGG
TTTACCGGCC GTAAAGAAGG CATAGCGGTC GAAGCCGTCG TATTACTCAG CCGCCAATAG
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| Protein sequence | MKIRIGHGFD VHKFGEARPL ILCGVEVPYE TGLVAHSDGD VVLHAISDAI LGAMALGDIG
KHFPDTDAAY KGADSRVLLR HCYALARAKG FELGNLDVTI IAQAPKMAPH IEDMRQVLAA
DLNADIADIN VKATTTEKLG FTGRKEGIAV EAVVLLSRQ
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