Gene Shewmr4_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1095 
SymbolnrdR 
ID4251063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand+ 
Start bp1287139 
End bp1287588 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID638117668 
Producttranscriptional regulator NrdR 
Protein accessionYP_733232 
Protein GI113969439 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.287796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.608767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTGTC CATTTTGCAG CGCGACAGAT ACTAAAGTGA TCGATTCCCG ATTAGTGGCG 
GAAGGCCATC AAGTGCGTCG TCGCCGAGAA TGCACCGAAT GCCACGAAAG ATTTACTACC 
TTCGAAGGGG CTGAATTAGT GATGCCACGG GTGATTAAAC GCGATGGCAC GCGCCAACCC 
TTCGATGAAG AAAAGCTGCA AGCAGGTATG TTACGCGCGG TCGAAAAGCG CCCTGTGTCT 
ATGGATGAAA TCGAGCAGGC CTTAAGTAAA ATCAAGTCAA CACTTAGGGC TACTGGCGAG 
CGCGAAGTGC CATCCGAGAT GATAGGTAAC TTGATGATGG AACAGTTAAT GAGCCTAGAT 
AAAGTTGCCT ATATTCGTTT TGCCTCGGTT TATCGCGCCT TTGAAGACGT CTCCGAATTT 
GGTGAGGCGA TTGCGAAACT GCAAAAGTAA
 
Protein sequence
MHCPFCSATD TKVIDSRLVA EGHQVRRRRE CTECHERFTT FEGAELVMPR VIKRDGTRQP 
FDEEKLQAGM LRAVEKRPVS MDEIEQALSK IKSTLRATGE REVPSEMIGN LMMEQLMSLD 
KVAYIRFASV YRAFEDVSEF GEAIAKLQK