Gene Shewmr4_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1089 
Symbol 
ID4251057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1279707 
End bp1280360 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content51% 
IMG OID638117662 
Productputative protein-disulfide isomerase 
Protein accessionYP_733226 
Protein GI113969433 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3531] Predicted protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA TTGAAAATCC CCCGGCCGTT TTACATGCCA TTATCGACCC TCTGTGCGGT 
TGGTGTTATG CCGCGGCACC ACTGTTTGAT GCCGCAGCCG CAGCCGGATT TAGCATCAAA
CTCTACGCGG GCGGCATGCT CACAGGGCCA AGACGCAAAC AGATTGATAA TCAATGGCGC
GACTATGTGA TGCCCCATGA TCAACGTATT GCCGCGCTAA CCGGACAAGT CTTTGGTGAA
AACTACTACG AAGGCCTATT GCGTGACACG AGTATCCTAT TAGATTCGGC GCTGCCCATC
AGGGCGTTAC TCGCAATGAC CGCCTTAGGT GGCAATGACT TAGCCTACTT GCATGCGATG
CAGCTCGGCC ATTATCGCGA TGGCAAGTGC GCAAGCGATG AAAATAATCT GCATCTTTTA
GCGGAAAAAT TGGGCATAGA TGGCGCCGCC TTTGCCCGGG AATATGCCGA AAATGAAGAA
GCCCTCTATC AACATATCGT CGCTTCGCGG GCATTAATGA ATCGGCTCGG CGCCCAAGGG
TTTCCCTCCG TGGCGCTAGA GACCAGTGAA GGTCATTTAA AGCTTATCAA TCACAGCCGC
TTTTACGGTC AACCTTCTGA GTGGCTTGAA TATCTGAAAG AGCAGCTATC CTAA
 
Protein sequence
MNTIENPPAV LHAIIDPLCG WCYAAAPLFD AAAAAGFSIK LYAGGMLTGP RRKQIDNQWR 
DYVMPHDQRI AALTGQVFGE NYYEGLLRDT SILLDSALPI RALLAMTALG GNDLAYLHAM
QLGHYRDGKC ASDENNLHLL AEKLGIDGAA FAREYAENEE ALYQHIVASR ALMNRLGAQG
FPSVALETSE GHLKLINHSR FYGQPSEWLE YLKEQLS