| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1083 |
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| Symbol | |
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| ID | 4250788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1268342 |
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| End bp | 1271497 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117656 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_733220 |
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| Protein GI | 113969427 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.126768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.966269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCTGT CCGATGTTTC CGTTAAGCGC CCCGTCGTCG CGATCGTTTT AAGCTTATTG
TTGTGCGTGT TTGGTTTAGT GTCCTTCACT AAACTGTCGG TACGAGAAAT GCCCGATGTC
GAAAGCCCAG TGGTGACCGT CAGTACCAGC TACTCAGGTG CCTCGGCCGC GATTATGGAG
AGCCAAATCA CTAAGACCCT CGAGGATGAA CTTACGGGGA TCAGCGGCAT CGATGAAATC
ACCTCAACCA CCCGTAATGG CAGCTCGCGG ATCACAGTGA AATTCCTCCT CGGTTGGAAC
TTAACCGAAG GCGTGAGTGA TGTGCGTGAC GCAGTGGCCC GCGCCCAGCG CCGCCTGCCT
GAAGATGCCA ACGATCCTGT CGTCTCTAAG GACAATGGCT CTGGCGAGCC CTCTGTCTAT
GTCAACTTAA GCTCAAGCGT AATGGACAGA ACTCAGCTGA CCGATTACGC CCAGCGCGTA
TTAGAAGACA GATTTAGCCT CATCAGCGGC GTGAGTTCCA TCAGCATCTC GGGCGGTTTG
TACAAGGTGA TGTACGTTAA GCTCAGACCC GAGCAAATGG CGGGACGCAA TGTTACTGTC
ACCGACATTA TTAACGCACT GCGTAAAGAA AACGTTGAAA CCCCAGGCGG TCAAGTACGT
AACGATACCA CTGTAATGTC TGTGCGCACT AAGCGACTCT ATTACACCCC GAAGGACTTT
GACTATTTGG TGGTTCGCAC CGCCAGCGAT GGCACGCCTA TCTATCTTAA GGATGTGGCG
GATGTGGCCG TTGGCGCCCA GAACGAAAAC TCCACCTTTA AGAGCGATGG TATCGTTAAC
TTAAGCTTAG GCGTCATCAC TCAGTCCGAT GCGAATCCTT TGATTGTGGC GCAGGAAGTC
CATAAAGAAG TCGATAGAAT TCAAGACTTT CTCCCCGAAG GCACAAGCCT AGTGGTGGAC
TTTGACTCGA CCGTCTTTAT CGACCGCTCA ATTAATGAGG TATACAACAC TCTCTATGTG
ACTGGCGCCC TTGTGGTATT AGTGCTGTAC ATCTTTATCG GCCAAACCAG AGCGACCCTC
ATCCCTGCGG TGACTGTACC TGTGTCGCTG ATTTCGGCCT TTATTGCCGC CAATATGTTC
GGCTACTCGA TTAACCTCTT GACGCTGATG GCATTAATTC TCGCCATCGG TCTTGTCGTT
GACGATGCCA TCGTGGTGGT AGAAAACATC TTCCACCATA TTGAGCGCGG TGAAGAGCCG
CTGCTCGCCG CTTACAAAGG CACGCGGGAA GTAGGTTTTG CGGTTGTGGC CACCACAGCA
GTGTTAGTCA TGGTGTTCCT GCCGATTTCC TTTATGGAGG GCATGGTCGG TTTACTCTTT
ACCGAGTTCT CGGTGATGCT GGCGGTATCC GTGCTGTTTT CTTCACTTAT CGCCCTGACG
CTGACACCAG TACTGAGTAG CAAACTGCTC AAGGCCAATG TTAAACCGAA CCGTTTTAAC
CGTTTCGTCG ACAGTGGTTT TGCCCGCATG GAAAAGGTTT ACCGTGTTGG CGTGACTCAG
GCGATCCGTT TTAAATGGTT GGCGCCACTG GTGATCCTCG CCTGCGTTGG CGGCAGTGCC
TGGTTAATGC AACAAGTGCC CTCACAGTTA GCACCGCAGG AAGACCGCGG CGTACTGTTC
GCCTTCGTAA AAGGCGCCGA AGGCACTAGC TATAACCGTA TGACAGCGAA CATGGACATA
GTCGAAGACC GATTGATGCC CCTGCTCGGC CAAGGCGTGT TACGTTCTTT TAGCGTTCAA
GCCCCCGCTT TCGGTGGCCG CGCTGGCGAT CAAACAGGCT TTGTGATCAT GCAGTTAGAG
GACTGGGAAC ATCGCCATGT CACGGCGCAA CAAGCTCTTG GCATTATCAG TAACGCCTTA
AAAGACATTC CCGACGTGAT GGTTCGCCCT ATGATGCCAG GCTTTAGGGG CCAATCGAGT
GAGCCAGTAC AATTCGTCCT CGGCGGCTCA GATTACGCCG AGCTGTTTAA ATGGGCGCAG
GTATTAAAAG AAGAAGCCAA TGCCAGTCCT ATGATGGAAG GCGCGGATTT AGATTATGCC
GAAACCACGC CGGAGCTTAT CGTCACCGTC GATAAAGAAC GGGCGGCGGA ACTTGGGATC
AGCGTCGACG AAGTCTCGCA AACCTTAGAA GTGATGCTCG GCGGTCGCAA AGAAACCACC
TATGTCGACC GAGGCGAAGA GTACGATGTG TATCTGCGCG GCGATGAAAA CAGCTTTAAC
AACGTCGGCG ATTTGAGCCA AATCTATATG CGCTCGGCCA AGGGCGAATT AGTGACGCTC
GATACCCTAA CCCATATCGA AGAAGTCGCA TCGGCACAAA AACTTAGCCA TACCAATAAG
CAAAAATCCA TCACCCTCAA GGCCAACATC AGTAAAGGCT ACACCTTGGG TGAAGCCTTG
AAGTTTTTGG ATAATAAGGC GATTGAGTTA TTACCTAAGG ATATTTCCAT CGGTTATACT
GGCGAATCTA AGGACTTTAA AGAAAACCAG AGCAGCATCT TAATCGTGTT CGGTTTAGCG
CTCCTAGTGG CTTATCTGGT TCTGGCGGCG CAATTTGAAA GCTTTATCAA CCCCTTAGTG
GTGATGTTTA CCGTGCCTAT GGGGGTATTC GGTGGCTTCC TTGGCCTGTT GGTTACCAGT
CAAGGCATTA ACATCTATAG CCAGATTGGG ATGATCATGT TGATTGGTAT GGTGACTAAA
AACGGTATCT TAATCGTCGA GTTTGCCAAC CAATTGCGTG ACCGAGGTTT AGCCCTAGAT
AAAGCCATTA TCGACGCTTC GACTCGTCGC TTACGCCCCA TTCTGATGAC AGCCTTCACC
ACCTTAGTAG GTGCTGTGCC GCTGATCTTC TCATCGGGCG CAGGCTCTGA AAGCCGGATT
GCCGTAGGTA CTGTAGTGTT CTTCGGTATG GCCTTTGCCA CCTTTGTGAC CCTGTTCGTG
ATCCCGGCCA TGTACCGCTT AATCTCGGCC GCGACCCATT CACCGGGTTA TGTTGAGGCA
AAACTCGAAG CGGCCATTAA GGCTCAAGAA TTAGCTGCGC AAGAATTAGC AGCGCAAGAG
GCTGCCAAAC AACAGGAACA AACAGCCAAA GCCTAG
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| Protein sequence | MWLSDVSVKR PVVAIVLSLL LCVFGLVSFT KLSVREMPDV ESPVVTVSTS YSGASAAIME
SQITKTLEDE LTGISGIDEI TSTTRNGSSR ITVKFLLGWN LTEGVSDVRD AVARAQRRLP
EDANDPVVSK DNGSGEPSVY VNLSSSVMDR TQLTDYAQRV LEDRFSLISG VSSISISGGL
YKVMYVKLRP EQMAGRNVTV TDIINALRKE NVETPGGQVR NDTTVMSVRT KRLYYTPKDF
DYLVVRTASD GTPIYLKDVA DVAVGAQNEN STFKSDGIVN LSLGVITQSD ANPLIVAQEV
HKEVDRIQDF LPEGTSLVVD FDSTVFIDRS INEVYNTLYV TGALVVLVLY IFIGQTRATL
IPAVTVPVSL ISAFIAANMF GYSINLLTLM ALILAIGLVV DDAIVVVENI FHHIERGEEP
LLAAYKGTRE VGFAVVATTA VLVMVFLPIS FMEGMVGLLF TEFSVMLAVS VLFSSLIALT
LTPVLSSKLL KANVKPNRFN RFVDSGFARM EKVYRVGVTQ AIRFKWLAPL VILACVGGSA
WLMQQVPSQL APQEDRGVLF AFVKGAEGTS YNRMTANMDI VEDRLMPLLG QGVLRSFSVQ
APAFGGRAGD QTGFVIMQLE DWEHRHVTAQ QALGIISNAL KDIPDVMVRP MMPGFRGQSS
EPVQFVLGGS DYAELFKWAQ VLKEEANASP MMEGADLDYA ETTPELIVTV DKERAAELGI
SVDEVSQTLE VMLGGRKETT YVDRGEEYDV YLRGDENSFN NVGDLSQIYM RSAKGELVTL
DTLTHIEEVA SAQKLSHTNK QKSITLKANI SKGYTLGEAL KFLDNKAIEL LPKDISIGYT
GESKDFKENQ SSILIVFGLA LLVAYLVLAA QFESFINPLV VMFTVPMGVF GGFLGLLVTS
QGINIYSQIG MIMLIGMVTK NGILIVEFAN QLRDRGLALD KAIIDASTRR LRPILMTAFT
TLVGAVPLIF SSGAGSESRI AVGTVVFFGM AFATFVTLFV IPAMYRLISA ATHSPGYVEA
KLEAAIKAQE LAAQELAAQE AAKQQEQTAK A
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