| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1052 |
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| Symbol | |
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| ID | 4251125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1231148 |
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| End bp | 1232326 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117625 |
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| Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
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| Protein accession | YP_733189 |
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| Protein GI | 113969396 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.653719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGT TAATCAACCT CTGGCGCACA CTAAACAAAC CCACAAAAGC TCTCACCTTA
GGCGCTGTCA GCATCAGTGC TTTTATCATG GGCATCATCT TCTGGGGCGG ATTTAACACC
GCACTGGAAG CCACCAACAC CGAAGCCTTC TGTATTAGCT GCCACAGTAT GGAAAGCAAG
CCTTACCAAG AGTTACAGGA AACAGTGCAT TGGTCGAATC ACTCTGGCGT GCGCGCTACC
TGCCCCGACT GCCACGTGCC CCACAACTGG AGCCGTAAGA TTGCCCGTAA GATGGAAGCT
TCGCACGATG TTTGGGGCTG GTTATTCAAC ACGGTCAACA CCCCTGAAAA ATTTGAAGCT
AAACGCCTCG AAATGGCGAG CCGCGAATGG AAACGTTTCG ATCGCGACAA TTCTCTGGCC
TGTAAGAATT GCCACAACTA CAACTCGATG AAGTGGGAAA GCATGTCACC ACTGGCGCAA
AAACAGATGA AACGCGCCGC CGAAATCGAC CAAAGCTGTA TCGATTGCCA CAAAGGCATT
GCCCACCATT TACCTGAAAT GGGCACGGCC CGCGCACCCG AACTCATCGC CGAAGTGGGC
GCTGGCGTCA GTTCAGTCGA AACCAACCAA ACCTACTACA GCGCCCTGAC TAAGCCACTG
TTCTTTAGTG AAAAAGGTGA CGTTGAAGCC GGTACCTTAA ACGTAGCCAC TAAAGTCAAA
GTGCTCGAAA CCCAAGGTAA GCGCATCAAA ATTGGCATCG ATGGCTGGCG TAAGAAAATC
GGTGCAGGCC GCGTGATCTA CATGGACTTT GGGGTAAACA TTCTGTCGGC GCAGTTAAGC
AAAGATGCCG CCGAAACCGA AGGTGTTATC CAAACCTTTG AAGAGAAAGA AGACCCAATG
ACAGGCCTGA AATGGCAACG GGTTGAAGCC CAAATCTGGA CCGATAAGGA TTACCTGCTC
ACCGAGCTGC AACCACTCTG GGGCTATGCC CGCGACACGT TCCGCTCAAG CTGTAGTGTG
TGCCACACCC AGCCAGATGA AGCGCATTTC GATGCCAATA CCTGGCCAGG CATGTTCCAA
GGCATGTTGG CCTTCGTGAA CATGGATCAA GACACCCAAG CGCTAGTGCA GAAATACCTG
CAGGAACATT CGTCAACCTT CGTGAAAAAA GAGCACTAA
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| Protein sequence | MKWLINLWRT LNKPTKALTL GAVSISAFIM GIIFWGGFNT ALEATNTEAF CISCHSMESK
PYQELQETVH WSNHSGVRAT CPDCHVPHNW SRKIARKMEA SHDVWGWLFN TVNTPEKFEA
KRLEMASREW KRFDRDNSLA CKNCHNYNSM KWESMSPLAQ KQMKRAAEID QSCIDCHKGI
AHHLPEMGTA RAPELIAEVG AGVSSVETNQ TYYSALTKPL FFSEKGDVEA GTLNVATKVK
VLETQGKRIK IGIDGWRKKI GAGRVIYMDF GVNILSAQLS KDAAETEGVI QTFEEKEDPM
TGLKWQRVEA QIWTDKDYLL TELQPLWGYA RDTFRSSCSV CHTQPDEAHF DANTWPGMFQ
GMLAFVNMDQ DTQALVQKYL QEHSSTFVKK EH
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