| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1045 |
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| Symbol | |
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| ID | 4251118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1220732 |
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| End bp | 1222096 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638117618 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_733182 |
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| Protein GI | 113969389 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.665867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0445974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA ATAAAACCGC GTACGTGTGC AATGAGTGTG GACAGGATTT TCCACGCTGG
CAAGGGCAAT GCAGTGCTTG TCAGGAGTGG AATACGATAA CTGAAGTGCG CTTAGGTGCC
GCCTCGCCCG GACGGGGAAC TAAGTTTGCG GGTTATGCCG GTGCTGGTAG TAGCGAAGTC
AAAACCTTAG ACCAAATTGA CCTTAATGCC TTGCCACGGA TTGTGAGCCA TTTTGGCGAG
CTCGACCGTG TGCTCGGGGG AGGCATAGTG CCAGGCTCTG CAATTCTGAT TGGCGGTCAT
CCCGGTGCGG GTAAGAGTAC GCTGTTACTC CAAACCCTGT GCCATTTAGC CGAGCAAATG
CCTGCGCTCT ATGTGACGGG TGAAGAGTCC CTGCAGCAAG TCGCTATGCG CGCCCATCGC
TTAGGGCTGC CGACCAATAA ACTGAGGATG TTATCCGAGA CCAGTGTGGA GCAGATCTGC
GAAGTCGCCC TGCAAGAATC GCCAAAAGTC ATCGTCGTCG ACTCTATTCA AGTCATGCAT
ATGAGCGATG TGGCGTCGAG CCCAGGCAGT GTGTCGCAGG TACGTGAATC GGCCTCCTAT
TTAACTCGCT TTGCCAAGCA AAACGGTATC GCCGTGATCA TGGTCGGCCA TGTGACTAAA
GACGGCAGCC TCGCCGGGCC TAAAGTGCTT GAGCACTGTA TCGATTGTTC TGTGATGTTT
GAAGGGGATA GCGACAGCCG TTATCGCACC TTGCGCTCCC ACAAGAACCG GTTCGGGGCG
ATTAACGAGT TAGGCGTATT CGCCATGACC GAGCGTGGTT TGAAGGAAGT GGCTAACCCT
TCAGCGATTT TCCTCTCCCG CGGCGAGGAG GAGTCCTCGG GCTCCTTAGT GATGGTGGTA
TGGGAAGGCA CGCGCCCGCT GTTGGTAGAA CTTCAGGTGC TAGTGGATAA TTCGGCGATG
TCGAACCCGC GCCGCGTCGC TGTGGGCATG GATGCGAACC GTTTAGCCAT GTTACTGGCA
GTGATGCATC GCCATGGTGG GTTACAAATG TCGGATCAGG ATGTGTTTGT CAACGTCGTT
GGCGGGGTTA AAGTGACGGA AACCAGTGCC GACTTAACCT TGCTGCTGGC CATGGTATCG
AGTTTCCGTG GCGATATTTT ACCGAGCGAT TTAGTGGTGT TCGGTGAAGT GGGCTTATCT
GGGGAAATTC GCCCCGTGCC CAATGGTCAA GAACGTTTAG TTGAAGCCGC CAAACATGGT
TTTAAGCGAG CGATCGTGCC CCGTGCCAAT GTGCCGAAAA AGCCGCCAGC GGGCATGGAA
GTAGTGGGCG TGGCAAAATT ATCCGAAGCC CTCGAAGCGA TATAA
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| Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACQEW NTITEVRLGA ASPGRGTKFA GYAGAGSSEV
KTLDQIDLNA LPRIVSHFGE LDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCHLAEQM
PALYVTGEES LQQVAMRAHR LGLPTNKLRM LSETSVEQIC EVALQESPKV IVVDSIQVMH
MSDVASSPGS VSQVRESASY LTRFAKQNGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF
EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ESSGSLVMVV
WEGTRPLLVE LQVLVDNSAM SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV
GGVKVTETSA DLTLLLAMVS SFRGDILPSD LVVFGEVGLS GEIRPVPNGQ ERLVEAAKHG
FKRAIVPRAN VPKKPPAGME VVGVAKLSEA LEAI
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