Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1018 |
Symbol | rrmJ |
ID | 4251091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1185821 |
End bp | 1186450 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117589 |
Product | 23S rRNA methyltransferase J |
Protein accession | YP_733155 |
Protein GI | 113969362 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0293] 23S rRNA methylase |
TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000167056 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000850135 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGGTA AAAAACGTAC GGCCAGTTCC ACCCGTTGGA TGCAGGAACA CTTTGATGAT CATTATGTCA AACTAGCACA GAAACGGGGA TTGCGTTCTC GCGCTGCGTT CAAGCTTGAG GAGCTCCAGG AGAAGGACCA ATTGATCCGC CCAGGTATGA CTGTGGTGGA CTTAGGTGCG GCTCCTGGTG GTTGGTCTCA AATAGCCGTC AAGCTGACCG GAGATAAAGG TAAAGTGATC GCCTGTGATA TTTTGCCAAT GGATCCCATC GTCGGCGTGG ATTTCTTGCA AGGGGACTTT CGTGAAGAGA AAGTGCTCGA AGCATTGCTA ACTCGCGTCG GTGCGGATAA GGTTGACGTT GTATTGTCTG ATATGGCGCC CAACATGAGT GGTTCCGATG GTGTCGATCA GCCGCGCGCC ATGTATTTAG TCGAACTGGC GTTAGATATG TGTCATCAAG TATTGGCACC TAACGGCAGT TTTGCGGTCA AAGTCTTTCA GGGGGAGGGG TTTGACGAAT ATATGAAGGC GGTAAAAGAC GCATTCAAAG TAGTAAAAAC ACGTAAACCG GACTCGTCGC GGGCACGCTC CCGTGAAGTC TATCTTGTGG CGACAGGGTA CAAGTTGTAG
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Protein sequence | MSGKKRTASS TRWMQEHFDD HYVKLAQKRG LRSRAAFKLE ELQEKDQLIR PGMTVVDLGA APGGWSQIAV KLTGDKGKVI ACDILPMDPI VGVDFLQGDF REEKVLEALL TRVGADKVDV VLSDMAPNMS GSDGVDQPRA MYLVELALDM CHQVLAPNGS FAVKVFQGEG FDEYMKAVKD AFKVVKTRKP DSSRARSREV YLVATGYKL
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