Gene Shewmr4_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1018 
SymbolrrmJ 
ID4251091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1185821 
End bp1186450 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID638117589 
Product23S rRNA methyltransferase J 
Protein accessionYP_733155 
Protein GI113969362 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000167056 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000850135 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGGTA AAAAACGTAC GGCCAGTTCC ACCCGTTGGA TGCAGGAACA CTTTGATGAT 
CATTATGTCA AACTAGCACA GAAACGGGGA TTGCGTTCTC GCGCTGCGTT CAAGCTTGAG
GAGCTCCAGG AGAAGGACCA ATTGATCCGC CCAGGTATGA CTGTGGTGGA CTTAGGTGCG
GCTCCTGGTG GTTGGTCTCA AATAGCCGTC AAGCTGACCG GAGATAAAGG TAAAGTGATC
GCCTGTGATA TTTTGCCAAT GGATCCCATC GTCGGCGTGG ATTTCTTGCA AGGGGACTTT
CGTGAAGAGA AAGTGCTCGA AGCATTGCTA ACTCGCGTCG GTGCGGATAA GGTTGACGTT
GTATTGTCTG ATATGGCGCC CAACATGAGT GGTTCCGATG GTGTCGATCA GCCGCGCGCC
ATGTATTTAG TCGAACTGGC GTTAGATATG TGTCATCAAG TATTGGCACC TAACGGCAGT
TTTGCGGTCA AAGTCTTTCA GGGGGAGGGG TTTGACGAAT ATATGAAGGC GGTAAAAGAC
GCATTCAAAG TAGTAAAAAC ACGTAAACCG GACTCGTCGC GGGCACGCTC CCGTGAAGTC
TATCTTGTGG CGACAGGGTA CAAGTTGTAG
 
Protein sequence
MSGKKRTASS TRWMQEHFDD HYVKLAQKRG LRSRAAFKLE ELQEKDQLIR PGMTVVDLGA 
APGGWSQIAV KLTGDKGKVI ACDILPMDPI VGVDFLQGDF REEKVLEALL TRVGADKVDV
VLSDMAPNMS GSDGVDQPRA MYLVELALDM CHQVLAPNGS FAVKVFQGEG FDEYMKAVKD
AFKVVKTRKP DSSRARSREV YLVATGYKL