| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1008 |
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| Symbol | |
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| ID | 4251046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1175299 |
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| End bp | 1176390 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117572 |
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| Product | GTP-dependent nucleic acid-binding protein EngD |
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| Protein accession | YP_733145 |
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| Protein GI | 113969352 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0012] Predicted GTPase, probable translation factor |
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| TIGRFAM ID | [TIGR00092] GTP-binding protein YchF |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000208433 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.179939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTA AATGCGGCAT TGTTGGTCTT CCTAACGTAG GTAAATCAAC GCTTTTTAAT
GCGTTAACTA AGGCTGGCAT CGAAGCGGCA AACTTCCCGT TTTGTACCAT CGAGCCAAAC
ACTGGCGTTG TACCTGTGCC GGATCCACGC TTAGACGCGC TGGCGGCGAT TGTTAATCCG
CAACGTGTGC TGCCAACCAC AATGGAATTC GTGGATATTG CTGGTCTAGT CGCGGGCGCG
TCGAAAGGTG AAGGCCTAGG TAACAAGTTC CTTGCTAACA TCCGCGAAAC CGATGCCATC
GGTCACGTTG TGCGTTGCTT TGAAGATGAC AACATTGTCC ACGTGGCTAA CCGTGTTGAC
CCTGCGCGCG ATATCGAAGT CATTAACACT GAATTGGCAT TAGCCGACTT AGACAGCTTA
GAGCGTGCGG TGATCCGTCA ACAAAAACGC GCTAAGGGCG GCGACAAAGA CGCTAAGTTT
GAAGTGGATG TTCTCGAGAA GATGCGTCCA ATCCTCGATG AAGGCCATAT GTTGCGTTCT
ATGGAGCTGT CTAAAGAAGA ATTAGAAGCG GTTGCTTACT TAAACTTCTT AACCTTAAAG
CCAACCATGT ACATCGCGAA CGTGGCTGAA GATGGTTTCG AAAATAACCC ACACTTAGAT
GCAGTGCGTG CCATTGCTGA AAAAGAAAAC GCCATTGTTG TGTCTGTGTG CGCCGCCATT
GAGTCAGAAC TGGCTGAAAT GGAGGCCGAA GAGCGTGATG AGTTTATGGC TGACCTCGGT
TTAGAAGAGC CAGGGTTAGA CCGCGTGATC CGCGCTGGTT ACCAATTACT GAGCCTGCAA
ACTTACTTTA CAGCGGGTGT AAAAGAAGTG CGCGCTTGGA CCGTTTCTGT AGGCGCGACT
GCACCACAAG CAGCGGGTGT TATCCACACC GACTTCGAAC GTGGCTTTAT TCGTGCTCAA
GTGATGGCAT TTGACGACTT TATTACCTAT AAAGGTGAAG CGGGCGCCAA AGAAGCGGGT
AAGTTACGTG TAGAAGGCAA GACATACATT GTTCAAGACG GCGATGTAAT GCACTTCCTG
TTTAACGTAT AA
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| Protein sequence | MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDPR LDALAAIVNP
QRVLPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFEDD NIVHVANRVD
PARDIEVINT ELALADLDSL ERAVIRQQKR AKGGDKDAKF EVDVLEKMRP ILDEGHMLRS
MELSKEELEA VAYLNFLTLK PTMYIANVAE DGFENNPHLD AVRAIAEKEN AIVVSVCAAI
ESELAEMEAE ERDEFMADLG LEEPGLDRVI RAGYQLLSLQ TYFTAGVKEV RAWTVSVGAT
APQAAGVIHT DFERGFIRAQ VMAFDDFITY KGEAGAKEAG KLRVEGKTYI VQDGDVMHFL
FNV
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