Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1000 |
Symbol | lnt |
ID | 4251038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 1166648 |
End bp | 1168198 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638117564 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_733137 |
Protein GI | 113969344 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.671685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0816035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTAACTA ACATTCGGGC TTTTGCCCAA CAAAAGTCCC GACTGAGCGT GTTACGGCTC GTGCTGGCGT TTATTTTAGG CGCCAGTACG GCGCTTTCCT TTGCCCCTTA TTCCTTGTGG ATTATCTATC CCGTCGCCAT GGCCTTAGCC CTGTGGCTGA GTGACTCCTT GACTCCTAAA GCCAGCTTCT TCCATTGGTT AAGCTTTGGT TTTGGCTGTT TTGCCGTTGG GATCAGTTGG GTGCATGTCA GTATGGACAC CTTCGGTGGC CTACCCTTGG CCGCCTCAGT GGGGCTAATG GCACTGTTAG CCCTCTATTT AGCCCTCTAT CCGGCCTTAA CGGGTCTCGG TTTAGCGTGG TTGACCCGCA CTAATACTCC CTCGCTATGG CGTAACCTGC TCCTCTTCCC CGCGCTTTGG GTCTTAACCG AATGGGCTAG AGGCTGGGTA ATGACAGGGT TTCCCTGGAT CTGGGCTGGT TACTCCCAAA CCCAAGGTCC ATTAAAGGAA CTCGCGAGTA TTATTGGTGC ACTAGGACTC AGTTTCTTAA TTGCGATGCT CGCAGGCGCC TTAGCCCTGT GTTTTAGCAA GCGCTACAAA AGCCTGTTGA TTTTACTGCC CATCATCGCG GCTGCGGCTT GGGTTGCCCC AAAGCTAACG CAAATCCAAC CGACAGGCGA GTCAGTCAAA GTTGCACTAG TGCAGGGAAA CATTCCCCAA AGTATGAAAT GGGAACCCGA GTCGCTCTGG CCAACCCTAC TGAAATACAT GGATTTATCC CGTGAGCACT TCGACGCTGA CATTATCGTC TGGCCAGAAG CAGCGATCCC TGCACCTGAC TACCAAGTGC AAGACTTTTT GGATAATGCT AACAAGGTCG CCAACCTTAA CCACACTTCA ATCATCACGG GGATTATTAG CCGTCAACAG AACGAGTTTT ATAACTCTTT GATCGTGCTA GGTAACCATA ATCAGAAACA GCAAGATACG CCGGATTATG AGAGCGGTGG CAGCAACCAG TTTAAGAAAC ACCATCTACT GCCTATCGGC GAGTTTGTAC CCTTTCAAGC CTTACTGCGC CCGATCGCAC CTTTCTTCAA TCTGCCGATG TCTTCCTTCG CTCGGGGCGA TTATCAACAG CCGAACTTGA GCGCCGTAGG CCATAAAATT GCTCCGGCAA TTTGTTATGA AATCGCCTTC CCAGAGCAGC TGCGTGACAG TGTTAACCTC GGCACCGATC TGCTGTTAAC CGTATCGAAC GATGCGTGGT TTGGCACCTC AAATGGGCCG TTGCAGCATA TGGAAATCGC CCAAATGCGC GCCATCGAAT TGGGCCGTCC GCTAGTGCGC GCCACCAACA ACGGCGTGAC CGCGGTAGTT GATGAGAAAG GCAATATCAC AGCTGCACTA CCGCAATTCG AAACGGGCGT GCTAAGCGCG ACGATTCCAC TGGTGACAGG CCAAACTTGG TTTGCCAAAA TCGGTCAAAC ACCACTGCTA CTGCTGTGTG GTGCGCTGCT GTTAGTCGGG TTTATTCGTC GTAAAAAATA A
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Protein sequence | MLTNIRAFAQ QKSRLSVLRL VLAFILGAST ALSFAPYSLW IIYPVAMALA LWLSDSLTPK ASFFHWLSFG FGCFAVGISW VHVSMDTFGG LPLAASVGLM ALLALYLALY PALTGLGLAW LTRTNTPSLW RNLLLFPALW VLTEWARGWV MTGFPWIWAG YSQTQGPLKE LASIIGALGL SFLIAMLAGA LALCFSKRYK SLLILLPIIA AAAWVAPKLT QIQPTGESVK VALVQGNIPQ SMKWEPESLW PTLLKYMDLS REHFDADIIV WPEAAIPAPD YQVQDFLDNA NKVANLNHTS IITGIISRQQ NEFYNSLIVL GNHNQKQQDT PDYESGGSNQ FKKHHLLPIG EFVPFQALLR PIAPFFNLPM SSFARGDYQQ PNLSAVGHKI APAICYEIAF PEQLRDSVNL GTDLLLTVSN DAWFGTSNGP LQHMEIAQMR AIELGRPLVR ATNNGVTAVV DEKGNITAAL PQFETGVLSA TIPLVTGQTW FAKIGQTPLL LLCGALLLVG FIRRKK
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