| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0999 |
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| Symbol | |
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| ID | 4251037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1166138 |
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| End bp | 1166632 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638117563 |
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| Product | methylation site containing protein |
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| Protein accession | YP_733136 |
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| Protein GI | 113969343 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0926979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0597088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTAATC AGAAACGCAT TCAAGGTTTT ACCTTAATCG AACTCGTCGT CGTTATCATA
GTGCTCGGGA TTTTAGCGGT TATTGCGGCG CCGAAATTTA TCGGTATGAG CAAAGAGGCG
CGGGAGAAAA GTCTGCTGCA ACTCCAAGCC AGCGTCAAAA CCGCCAATAC CTTGGCCTAT
TCCAAGACCC AAATGCCCAG TTTGCAAAGC CAAGCCGTTG TGGGCCGTGA CGATATTATC
GACATCGACC TCGATGGTAA TGGCACGGTC GACACTCGTC TCAAGTGGGG ATATCTGGAC
AATACCGATA TCGAAAAATG GATAACGAAA GACGATAAAC TCGTTATTCA ATACCAAGGC
ATTGATATTA CTTATATTGG TTACGACTTA AATGACAATT CTATCGTCGA CGACGATCAG
TGTTATTTCC GCTACACCCA AGCTGCCGAT TCGAGCACTC CGCCGCTTTA CGATATCAAT
GTTCAAGGCT GTTGA
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| Protein sequence | MINQKRIQGF TLIELVVVII VLGILAVIAA PKFIGMSKEA REKSLLQLQA SVKTANTLAY
SKTQMPSLQS QAVVGRDDII DIDLDGNGTV DTRLKWGYLD NTDIEKWITK DDKLVIQYQG
IDITYIGYDL NDNSIVDDDQ CYFRYTQAAD SSTPPLYDIN VQGC
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