| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0989 |
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| Symbol | |
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| ID | 4251027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1155570 |
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| End bp | 1156634 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117553 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_733126 |
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| Protein GI | 113969333 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000275469 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0108965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATTC TTCGAGCTTG TTTGGCTCCA CTGGCAGTGC TTTGCCTCAG TTCATACCTC
ATTGGCTGCT CAACCGCGAA CGAGCCAGCA ACAACGACAC CGCCACCAAG CGCGGCCGTG
ACCACACAGG CGCCAACACC TGTATTACCC GAGGCCTTAA AGGCAGAGTT TATTAAAACC
CAAATGGCAC AAGGCTTTAC TCAAGCCGAA GTGGAAAATT TCTTGGCCAA AGCCAACTAC
AACCAGACTG TTATCGATGC GATTTCTCGC CCTTGGGAAG CTAAGCCTTG GCATCAGTAT
TATCCAATTT TCCTCACAGA GAAACGCCTC AACGCGGGCC TAGCCTTCTG GAAAAAACAC
GAGGCGATGA TTGCCAAAGC TGCCACTCAA TACCAAGTTG AGCCACAAAT TATTGTGGCC
ATTATTGGTA TCGAAACCTT CTATGGTCAG TACACGGGCA ATTATCCGGT AATCGACGCG
CTCTACACCT TAGGGTTTTA TTACGAGCCA AGAGCCACTT TCTTTCGCAA GGAATTTGGC
GAGCTGATGA AGCTGGTAAA AGAAGAACAC TTAGATATCA ATAGCCTCAA GGGTTCTTAC
GCTGGCGCCA TGGGCTTTGG TCAGTTTATT CCGTCAAGCT ACCGCCACTA TGCCGTGGAT
TTTGATGGCA GCGGCAACCG TGATTTACTC CAGAGTCCAG AGGATGCCAT CGGCAGTGTT
GCCAATTATT TCCATGAACA CGGCTGGCAA TTGCACGCGC CCGTTGCGCT TCCTTTAGTG
AACAGCAGTC CCAATGCGCC TAAAGCCAAA GTGTGGGCCG GCGAAAAGTT GCAGTACAAG
GTTTCTGATA TTCTCTCCCC AAGCTTATCG CTGGCCACCG CCCGCGATTT AGATGCCTCG
CAAAAGGCCA TGCTTATCGA ACTGGAACAA GTGGATAGCA AGGACTACTG GTTAGGGCTT
AATAACTTTT ATGTGATCAC CCGTTATAAC CGTAGCCCTT TGTATTCCAT GGCCGTTTAC
CAATTTAGCC AACAACTGAA GCAACAACAT GACGCTAAGA AATAA
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| Protein sequence | MPILRACLAP LAVLCLSSYL IGCSTANEPA TTTPPPSAAV TTQAPTPVLP EALKAEFIKT
QMAQGFTQAE VENFLAKANY NQTVIDAISR PWEAKPWHQY YPIFLTEKRL NAGLAFWKKH
EAMIAKAATQ YQVEPQIIVA IIGIETFYGQ YTGNYPVIDA LYTLGFYYEP RATFFRKEFG
ELMKLVKEEH LDINSLKGSY AGAMGFGQFI PSSYRHYAVD FDGSGNRDLL QSPEDAIGSV
ANYFHEHGWQ LHAPVALPLV NSSPNAPKAK VWAGEKLQYK VSDILSPSLS LATARDLDAS
QKAMLIELEQ VDSKDYWLGL NNFYVITRYN RSPLYSMAVY QFSQQLKQQH DAKK
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