Gene Shewmr4_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0977 
Symbol 
ID4251628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1144085 
End bp1145053 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content49% 
IMG OID638117540 
Producthypothetical protein 
Protein accessionYP_733114 
Protein GI113969321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0681131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGACG CGATTTGTGT ACTCACAACC GAGGCAGCGG CAGAGCACGC TTCGTCGCCA 
TTACGACTCA ATCCTCATGC TCAGGCTGGT GTCACCTACA GTGTGTTCAA GTTTCAGCAG
TTACCCGAGG CTGAGATTGA GCGTTTGCGC CAGCATTTAT ATTGCCCCGC CTGCTACGGC
AAAGCCTATT TTCGTAAAGC ATCTAAGGAT GGTAGGGCCG CCTGTTTTGG CTCCCGTTAT
CATGAGCTCG ATTGCATCGA ATTTAATCCG TCGGCGCAAA AGTCCCGTGA AGAACAAGAT
GCCCTCGAAG TGCAGCAACA ACTGCTCGAC GCCGATGCCT TGGTTATCGA TTTTTCGGTT
AATCCCAGTA ATAAGAGACC CTCTAACTCA GCGCACAAAA TCAGGGCTTC CCAAGAGCAA
GAGGTTGGAG CCAAAAGTGA ACTTGAAAAT GATACCGAGC CATTAGCGTC AGTACAGGAG
CCCAAAGCTG ACTATCAAGT GGCGGCCGAT AAGCCCGAGA TAGCCATCAC GGCAAAGTGT
ACTCCGAGCC AAGGGCTAGA AAAGTTACTC CATAGCCTGC TGCGCGGCTC GGATTTGGCG
GCTTCGGATC TTTGGGTTTA CACCGATGAT GAGCGAAAGT ACCGCTGGCG GGCGAAGAAT
TTGTTTGTGA ATTTTGCCGA TGCGGATCCG ACGGATAACA AACCCCATAT GTACTGGGGT
ACTATCTCTC ATAGCGACCC GACGTTATCT TGGCTCAATC CCGCCGACAG TAAAGACATA
GGTATTCCTA TTGAGGCCGT CAAAACTAAA TTGTTTAAGC GCTTTAATAT CGAAGATAAA
CGGGATTTAG AGGGCGCTGG GCTTATCCTG TTTGGTAAGT GTTTTTGGAA TAAGGATAAG
ACCCGCAAGA TTATCCAGCT TTGGGACAAT GATTTGCGGC GGATTTTTAT CTCAACCCTT
GATGATTAA
 
Protein sequence
MLDAICVLTT EAAAEHASSP LRLNPHAQAG VTYSVFKFQQ LPEAEIERLR QHLYCPACYG 
KAYFRKASKD GRAACFGSRY HELDCIEFNP SAQKSREEQD ALEVQQQLLD ADALVIDFSV
NPSNKRPSNS AHKIRASQEQ EVGAKSELEN DTEPLASVQE PKADYQVAAD KPEIAITAKC
TPSQGLEKLL HSLLRGSDLA ASDLWVYTDD ERKYRWRAKN LFVNFADADP TDNKPHMYWG
TISHSDPTLS WLNPADSKDI GIPIEAVKTK LFKRFNIEDK RDLEGAGLIL FGKCFWNKDK
TRKIIQLWDN DLRRIFISTL DD