| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0974 |
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| Symbol | |
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| ID | 4251625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1141167 |
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| End bp | 1141826 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117537 |
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| Product | ribose-5-phosphate isomerase A |
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| Protein accession | YP_733111 |
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| Protein GI | 113969318 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0120] Ribose 5-phosphate isomerase |
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| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.461351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAAG ATGAAATGAA AAAAGCCGCT GGCTGGGCTG CTCTCAAATA CGTTGAGAAA
GACAGCATTG TGGGTGTAGG CACTGGCTCA ACCGTCAATC ACTTTATCGA TGCCCTCGCC
ACCATGAAGG CCGATATTGA AGGTGCGGTA TCAAGCTCAG AAGCCTCAAC CCAAAAAATG
AAAGCCCTTG GCATCCCAGT TTATGACTTA AACAGCGTCG ATAAATTATC TGTGTATGTC
GATGGTGCCG ATGAAATCAA CGGCCATATG GACATGATCA AAGGCGGCGG CGCGGCATTA
ACCCGCGAGA AAATCGTTGC GGCTGTGGCT GAAAAGTTTG TCTGTATCGT GGATAACACT
AAACAAGTGG ATATTTTGGG TGAATTCCCA CTGCCCGTTG AAGTGATCCC AATGGCGCGT
TCTTACGTGG CCCGTGAACT CGTCAAACTC GGCGGCGACC CAGTGTACCG TGAAGGCGTT
GTGACTGATA ACGGCAACGT AATCCTCGAC GTTTACAACC TTAAGATCAT CAATCCTAAG
GAATTAGAAG AGAAGATCAA CGCCATCGTC GGCGTAGTGA CTAACGGTTT GTTCGCGAAA
CGCGGCGCCG ATGTGTTACT GGTTGGCACC CCTGAAGGCG TGAAAACCTT TACCGCTTAA
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| Protein sequence | MTQDEMKKAA GWAALKYVEK DSIVGVGTGS TVNHFIDALA TMKADIEGAV SSSEASTQKM
KALGIPVYDL NSVDKLSVYV DGADEINGHM DMIKGGGAAL TREKIVAAVA EKFVCIVDNT
KQVDILGEFP LPVEVIPMAR SYVARELVKL GGDPVYREGV VTDNGNVILD VYNLKIINPK
ELEEKINAIV GVVTNGLFAK RGADVLLVGT PEGVKTFTA
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